RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FAM161AQ3B820 660 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 PLA2G12BQ9BX93 195 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 COA1Q9GZY4 146 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 LEMD3Q9Y2U8 911 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
CBX3P4-202ENST00000540428 IGHMBP2P38935 993 aaKnown RBP15.38■□□□□ 0.05
CBX3P4-202ENST00000540428 DGKZQ13574 1117 aa15.38■□□□□ 0.05
CBX3P4-202ENST00000540428 STRIP1Q5VSL9 837 aa15.38■□□□□ 0.05
CBX3P4-202ENST00000540428 MLLT1Q03111 559 aaPredicted RBP15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 GCKRQ14397 625 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 CSRNP1Q96S65 589 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 RNF186Q9NXI6 227 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 PSME4Q14997 1843 aa15.37■□□□□ 0.05
CBX3P4-202ENST00000540428 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 G2E3Q7L622 706 aa15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 RASAL3Q86YV0 1011 aa15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 ANKRD2Q9GZV1 360 aa15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
CBX3P4-202ENST00000540428 POLR2AP24928 1970 aaKnown RBP15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 PAPPA2Q9BXP8 1791 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 CSF1RP07333 972 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 ITGA6P23229 1130 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 CASP7P55210 303 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 CCDC184Q52MB2 194 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
CBX3P4-202ENST00000540428 WNT10BO00744 389 aa15.34■□□□□ 0.05
CBX3P4-202ENST00000540428 TRPA1O75762 1119 aa15.34■□□□□ 0.05
CBX3P4-202ENST00000540428 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
CBX3P4-202ENST00000540428 CASP8AP2Q9UKL3 1982 aa15.34■□□□□ 0.05
CBX3P4-202ENST00000540428 ZNF804BA4D1E1 1349 aa15.34■□□□□ 0.05
CBX3P4-202ENST00000540428 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
CBX3P4-202ENST00000540428 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
CBX3P4-202ENST00000540428 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
CBX3P4-202ENST00000540428 NF2P35240 595 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 WDR63Q8IWG1 891 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 HDAC9Q9UKV0 1011 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 MYH3P11055 1940 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
CBX3P4-202ENST00000540428 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
CBX3P4-202ENST00000540428 VAMP4O75379 141 aa15.31■□□□□ 0.04
CBX3P4-202ENST00000540428 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
CBX3P4-202ENST00000540428 UBE2Q2LH0YL09 131 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 KLRK1P26718 216 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 KCNJ4P48050 445 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 CHRNDQ07001 517 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 MOB2Q70IA6 237 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 CD209Q9NNX6 404 aa15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
CBX3P4-202ENST00000540428 SASH1O94885 1247 aa15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 GTF2IP78347 998 aa15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 TTLL12Q14166 644 aaPredicted RBP15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 PRAMEF18Q5VWM3 479 aa15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 KIAA0825Q8IV33 1275 aa15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
CBX3P4-202ENST00000540428 COL1A1P02452 1464 aaPredicted RBP15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 IRS2Q9Y4H2 1338 aa15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 TM4SF4P48230 202 aa15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 IFIT5Q13325 482 aaKnown RBP15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 NOM1Q5C9Z4 860 aaKnown RBP15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 ARMC9Q7Z3E5 817 aa15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 ZNF646O15015 1829 aaPredicted RBP15.28■□□□□ 0.04
CBX3P4-202ENST00000540428 FOXO4P98177 505 aa15.27■□□□□ 0.04
CBX3P4-202ENST00000540428 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
CBX3P4-202ENST00000540428 BEND3Q5T5X7 828 aa15.27■□□□□ 0.04
CBX3P4-202ENST00000540428 MTMR14Q8NCE2 650 aa15.27■□□□□ 0.04
CBX3P4-202ENST00000540428 AKAP11Q9UKA4 1901 aa15.27■□□□□ 0.03
CBX3P4-202ENST00000540428 SPEF2Q9C093 1822 aa15.27■□□□□ 0.03
CBX3P4-202ENST00000540428 IL1R1P14778 569 aa15.26■□□□□ 0.03
CBX3P4-202ENST00000540428 FKBP1AP62942 108 aaKnown RBP15.26■□□□□ 0.03
CBX3P4-202ENST00000540428 SREBF2Q12772 1141 aa15.26■□□□□ 0.03
CBX3P4-202ENST00000540428 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
CBX3P4-202ENST00000540428 ANP32CO43423 234 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 TAF5LO75529 589 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 DLGAP5Q15398 846 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 LDLRAD1Q5T700 205 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 CFHR5Q9BXR6 569 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 PPP2R3BQ9Y5P8 575 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
CBX3P4-202ENST00000540428 F6X3S4 739 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 SLC34A2O95436 690 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 PTPN12Q05209 780 aaKnown RBP15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 CCDC57Q2TAC2 916 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 DEFB129Q9H1M3 183 aa15.24■□□□□ 0.03
CBX3P4-202ENST00000540428 UNCXA6NJT0 531 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 GPR25O00155 361 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms