RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
MDH1-215ENST00000539945 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
MDH1-215ENST00000539945 ERC2O15083 957 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 GLRX3O76003 335 aaKnown RBP11.8□□□□□ -0.52
MDH1-215ENST00000539945 CIAO1O76071 339 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 CCNL1Q9UK58 526 aaPredicted RBP11.8□□□□□ -0.52
MDH1-215ENST00000539945 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
MDH1-215ENST00000539945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.8□□□□□ -0.52
MDH1-215ENST00000539945 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 EYA2O00167 538 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
MDH1-215ENST00000539945 COL9A1P20849 921 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 IL15P40933 162 aaPredicted RBP11.79□□□□□ -0.52
MDH1-215ENST00000539945 KCNQ4P56696 695 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
MDH1-215ENST00000539945 TFCP2Q12800 502 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 ATG9AQ7Z3C6 839 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
MDH1-215ENST00000539945 PDE8AO60658 829 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 CTSWP56202 376 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
MDH1-215ENST00000539945 FPGT-TNNI3KV9GXZ4 949 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 TAF1LQ8IZX4 1826 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 MYH3P11055 1940 aa11.78□□□□□ -0.52
MDH1-215ENST00000539945 REC8O95072 547 aa11.77□□□□□ -0.52
MDH1-215ENST00000539945 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.52
MDH1-215ENST00000539945 CHMLP26374 656 aa11.77□□□□□ -0.52
MDH1-215ENST00000539945 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.52
MDH1-215ENST00000539945 MFSD10Q14728 455 aa11.77□□□□□ -0.52
MDH1-215ENST00000539945 CNTROBQ8N137 903 aa11.77□□□□□ -0.52
MDH1-215ENST00000539945 RILPL2Q969X0 211 aa11.77□□□□□ -0.52
MDH1-215ENST00000539945 CCDC8Q9H0W5 538 aaPredicted RBP11.77□□□□□ -0.52
MDH1-215ENST00000539945 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.52
MDH1-215ENST00000539945 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
MDH1-215ENST00000539945 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.53
MDH1-215ENST00000539945 EPAS1Q99814 870 aa11.77□□□□□ -0.53
MDH1-215ENST00000539945 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.77□□□□□ -0.53
MDH1-215ENST00000539945 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
MDH1-215ENST00000539945 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
MDH1-215ENST00000539945 NIP7Q9Y221 180 aaKnown RBP eCLIP11.77□□□□□ -0.53
MDH1-215ENST00000539945 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
MDH1-215ENST00000539945 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 GNPATO15228 680 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 NTSR2O95665 410 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 LRRC24Q50LG9 513 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
MDH1-215ENST00000539945 DBNLQ9UJU6 430 aaKnown RBP11.76□□□□□ -0.53
MDH1-215ENST00000539945 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 AK9Q5TCS8 1911 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 ATP5JP18859 108 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 ITGA6P23229 1130 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
MDH1-215ENST00000539945 BECN1Q14457 450 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 PUS3Q9BZE2 481 aaKnown RBP11.75□□□□□ -0.53
MDH1-215ENST00000539945 GREM2Q9H772 168 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
MDH1-215ENST00000539945 RTL9Q8NET4 1388 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
MDH1-215ENST00000539945 ZPR1O75312 459 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
MDH1-215ENST00000539945 TAF7LQ5H9L4 462 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 TRAF7Q6Q0C0 670 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
MDH1-215ENST00000539945 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 LAMB2P55268 1798 aa11.74□□□□□ -0.53
MDH1-215ENST00000539945 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
MDH1-215ENST00000539945 TRIM37O94972 964 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
MDH1-215ENST00000539945 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
MDH1-215ENST00000539945 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
MDH1-215ENST00000539945 KIF2CQ99661 725 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
MDH1-215ENST00000539945 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 RIPOR2Q9Y4F9 1068 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 ZNF609O15014 1411 aa11.73□□□□□ -0.53
MDH1-215ENST00000539945 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 GFRA3O60609 400 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 RXRBP28702 533 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms