RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ATP6V0A2Q9Y487 856 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 NDUFB9Q9Y6M9 179 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 AKAP11Q9UKA4 1901 aa19.64■□□□□ 0.73
TRAF3-204ENST00000539721 UQCRFS1P1P0C7P4 283 aa19.64■□□□□ 0.73
TRAF3-204ENST00000539721 ZNF512BQ96KM6 892 aaPredicted RBP19.64■□□□□ 0.73
TRAF3-204ENST00000539721 NSFL1CQ9UNZ2 370 aaKnown RBP19.64■□□□□ 0.73
TRAF3-204ENST00000539721 SLX4Q8IY92 1834 aa19.64■□□□□ 0.73
TRAF3-204ENST00000539721 ARID4AP29374 1257 aaPredicted RBP19.63■□□□□ 0.73
TRAF3-204ENST00000539721 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
TRAF3-204ENST00000539721 TMX4Q9H1E5 349 aaPredicted RBP19.63■□□□□ 0.73
TRAF3-204ENST00000539721 LTBP1Q14766 1721 aa19.63■□□□□ 0.73
TRAF3-204ENST00000539721 ATP2B4P23634 1241 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 BCAMP50895 628 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 SCARF1Q14162 830 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 CAVIN4Q5BKX8 364 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 PRPF40BQ6NWY9 871 aaKnown RBP19.62■□□□□ 0.73
TRAF3-204ENST00000539721 PAG1Q9NWQ8 432 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 GOLIM4O00461 696 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 MCAMP43121 646 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 GYG1P46976 350 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 SGIP1Q9BQI5 828 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 FSD1Q9BTV5 496 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 SNRKQ9NRH2 765 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 PODXL2Q9NZ53 605 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 GGA1Q9UJY5 639 aa19.62■□□□□ 0.73
TRAF3-204ENST00000539721 UFL1O94874 794 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 SEC24BO95487 1268 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 CHMLP26374 656 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 KLRK1P26718 216 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 FKBP4Q02790 459 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRAF3-204ENST00000539721 VPS37DQ86XT2 251 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 MYH13Q9UKX3 1938 aa19.61■□□□□ 0.73
TRAF3-204ENST00000539721 DPEP1P16444 411 aa19.6■□□□□ 0.73
TRAF3-204ENST00000539721 GNL3LQ9NVN8 582 aaKnown RBP19.6■□□□□ 0.73
TRAF3-204ENST00000539721 A0A0G2JLW4 131 aa19.6■□□□□ 0.73
TRAF3-204ENST00000539721 PTGER2P43116 358 aa19.6■□□□□ 0.73
TRAF3-204ENST00000539721 ZAP70P43403 619 aa19.6■□□□□ 0.73
TRAF3-204ENST00000539721 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
TRAF3-204ENST00000539721 IRS2Q9Y4H2 1338 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 MFAP1P55081 439 aaKnown RBP19.59■□□□□ 0.73
TRAF3-204ENST00000539721 TGFB2P61812 414 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 OLFM4Q6UX06 510 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 PI16Q6UXB8 463 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 FBXO33Q7Z6M2 555 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 MPNDQ8N594 471 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 TBC1D16Q8TBP0 767 aa19.59■□□□□ 0.73
TRAF3-204ENST00000539721 PPP1R1BQ9UD71 204 aaPredicted RBP19.59■□□□□ 0.73
TRAF3-204ENST00000539721 HIBADHP31937 336 aaKnown RBP19.58■□□□□ 0.73
TRAF3-204ENST00000539721 RASGRF1Q13972 1273 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 KLHL34Q8N239 644 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 KBTBD3Q8NAB2 608 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 SPATA5Q8NB90 893 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 DIAPH3Q9NSV4 1193 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 HMG20BQ9P0W2 317 aa19.58■□□□□ 0.73
TRAF3-204ENST00000539721 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.73
TRAF3-204ENST00000539721 RFX7Q2KHR2 1363 aa19.58■□□□□ 0.72
TRAF3-204ENST00000539721 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 HIP1O00291 1037 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 DPP8Q6V1X1 898 aaPredicted RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 TXNRD3Q86VQ6 643 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 TTLL6Q8N841 843 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 GPR101Q96P66 508 aaPredicted RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 ANTXR1Q9H6X2 564 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 POLLQ9UGP5 575 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 MYH7P12883 1935 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 DUOX1Q9NRD9 1551 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 C15orf52Q6ZUT6 534 aaKnown RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 UPF2Q9HAU5 1272 aaKnown RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 SPON1Q9HCB6 807 aa19.57■□□□□ 0.72
TRAF3-204ENST00000539721 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
TRAF3-204ENST00000539721 KCNA3P22001 575 aa19.56■□□□□ 0.72
TRAF3-204ENST00000539721 TTF1Q15361 905 aaPredicted RBP19.56■□□□□ 0.72
TRAF3-204ENST00000539721 ZNF804AQ7Z570 1209 aa19.56■□□□□ 0.72
TRAF3-204ENST00000539721 ESYT1Q9BSJ8 1104 aa19.56■□□□□ 0.72
TRAF3-204ENST00000539721 MED23Q9ULK4 1368 aa19.56■□□□□ 0.72
TRAF3-204ENST00000539721 MYO5AQ9Y4I1 1855 aaKnown RBP19.55■□□□□ 0.72
TRAF3-204ENST00000539721 CYP2E1P05181 493 aaPredicted RBP19.55■□□□□ 0.72
TRAF3-204ENST00000539721 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
TRAF3-204ENST00000539721 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
TRAF3-204ENST00000539721 SEMA3EO15041 775 aa19.55■□□□□ 0.72
TRAF3-204ENST00000539721 FRAT2O75474 233 aaPredicted RBP19.55■□□□□ 0.72
TRAF3-204ENST00000539721 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
TRAF3-204ENST00000539721 RUFY2Q8WXA3 655 aa19.55■□□□□ 0.72
TRAF3-204ENST00000539721 DENND2AQ9ULE3 1009 aa19.55■□□□□ 0.72
TRAF3-204ENST00000539721 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
TRAF3-204ENST00000539721 CC2D2BQ6DHV5 1058 aa19.54■□□□□ 0.72
TRAF3-204ENST00000539721 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
TRAF3-204ENST00000539721 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
TRAF3-204ENST00000539721 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
TRAF3-204ENST00000539721 NMIQ13287 307 aaPredicted RBP19.53■□□□□ 0.72
TRAF3-204ENST00000539721 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
TRAF3-204ENST00000539721 TICAM2Q86XR7 235 aa19.53■□□□□ 0.72
TRAF3-204ENST00000539721 C21orf2O43822 256 aa19.52■□□□□ 0.72
TRAF3-204ENST00000539721 EYA3Q99504 573 aa19.52■□□□□ 0.72
TRAF3-204ENST00000539721 PIH1D3Q9NQM4 214 aaKnown RBP19.52■□□□□ 0.72
TRAF3-204ENST00000539721 RIMBP2O15034 1052 aa19.52■□□□□ 0.71
TRAF3-204ENST00000539721 REC8O95072 547 aa19.52■□□□□ 0.71
TRAF3-204ENST00000539721 FAM227BQ96M60 508 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms