RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SUCLG2Q96I99 432 aa21.25■□□□□ 0.99
DDB1-215ENST00000539712 ZNF594Q96JF6 807 aaPredicted RBP21.25■□□□□ 0.99
DDB1-215ENST00000539712 PTPRCP08575 1304 aa21.25■□□□□ 0.99
DDB1-215ENST00000539712 ZNF646O15015 1829 aaPredicted RBP21.25■□□□□ 0.99
DDB1-215ENST00000539712 DACT2Q5SW24 774 aa21.24■□□□□ 0.99
DDB1-215ENST00000539712 USP48Q86UV5 1035 aa21.24■□□□□ 0.99
DDB1-215ENST00000539712 COA1Q9GZY4 146 aa21.24■□□□□ 0.99
DDB1-215ENST00000539712 ABT1Q9ULW3 272 aaKnown RBP21.24■□□□□ 0.99
DDB1-215ENST00000539712 ASTN2O75129 1339 aaPredicted RBP21.24■□□□□ 0.99
DDB1-215ENST00000539712 TAF5LO75529 589 aa21.23■□□□□ 0.99
DDB1-215ENST00000539712 ALDH1L2Q3SY69 923 aa21.23■□□□□ 0.99
DDB1-215ENST00000539712 COL13A1Q5TAT6 717 aaPredicted RBP21.23■□□□□ 0.99
DDB1-215ENST00000539712 HELBQ8NG08 1087 aaPredicted RBP21.23■□□□□ 0.99
DDB1-215ENST00000539712 MXD3Q9BW11 206 aa21.23■□□□□ 0.99
DDB1-215ENST00000539712 TLL2Q9Y6L7 1015 aa21.23■□□□□ 0.99
DDB1-215ENST00000539712 POLR2AP24928 1970 aaKnown RBP21.23■□□□□ 0.99
DDB1-215ENST00000539712 CELF2O95319 508 aaKnown RBP21.22■□□□□ 0.99
DDB1-215ENST00000539712 KIF4BQ2VIQ3 1234 aa21.22■□□□□ 0.99
DDB1-215ENST00000539712 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
DDB1-215ENST00000539712 CHMP3Q9Y3E7 222 aa21.22■□□□□ 0.99
DDB1-215ENST00000539712 USP17L8P0C7I0 530 aa21.21■□□□□ 0.99
DDB1-215ENST00000539712 CCDC57Q2TAC2 916 aa21.21■□□□□ 0.99
DDB1-215ENST00000539712 C15orf52Q6ZUT6 534 aaKnown RBP21.21■□□□□ 0.99
DDB1-215ENST00000539712 SAPCD2Q86UD0 394 aa21.21■□□□□ 0.99
DDB1-215ENST00000539712 WDR33Q9C0J8 1336 aaKnown RBP21.21■□□□□ 0.99
DDB1-215ENST00000539712 A0A1B0GUL6 1792 aa21.2■□□□□ 0.99
DDB1-215ENST00000539712 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
DDB1-215ENST00000539712 STRIP1Q5VSL9 837 aa21.2■□□□□ 0.98
DDB1-215ENST00000539712 KRT26Q7Z3Y9 468 aa21.2■□□□□ 0.98
DDB1-215ENST00000539712 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
DDB1-215ENST00000539712 USP44Q9H0E7 712 aa21.2■□□□□ 0.98
DDB1-215ENST00000539712 ADM5C9JUS6 153 aa21.19■□□□□ 0.98
DDB1-215ENST00000539712 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
DDB1-215ENST00000539712 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
DDB1-215ENST00000539712 WBP1LQ9NX94 342 aa21.19■□□□□ 0.98
DDB1-215ENST00000539712 SCARF1Q14162 830 aa21.18■□□□□ 0.98
DDB1-215ENST00000539712 CYP4F22Q6NT55 531 aa21.18■□□□□ 0.98
DDB1-215ENST00000539712 CAPNS2Q96L46 248 aa21.18■□□□□ 0.98
DDB1-215ENST00000539712 PUS3Q9BZE2 481 aaKnown RBP21.18■□□□□ 0.98
DDB1-215ENST00000539712 CD209Q9NNX6 404 aa21.18■□□□□ 0.98
DDB1-215ENST00000539712 MYOZ2Q9NPC6 264 aa21.18■□□□□ 0.98
DDB1-215ENST00000539712 FOXN1O15353 648 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 CT47B1P0C2W7 299 aaPredicted RBP21.17■□□□□ 0.98
DDB1-215ENST00000539712 KCNJ4P48050 445 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
DDB1-215ENST00000539712 TTLL5Q6EMB2 1281 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 MIER1Q8N108 512 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 DCPSQ96C86 337 aaKnown RBP21.17■□□□□ 0.98
DDB1-215ENST00000539712 ZNF408Q9H9D4 720 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 SMC4Q9NTJ3 1288 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 GGA3Q9NZ52 723 aa21.17■□□□□ 0.98
DDB1-215ENST00000539712 HHIPL1Q96JK4 782 aa21.16■□□□□ 0.98
DDB1-215ENST00000539712 RIPOR2Q9Y4F9 1068 aa21.16■□□□□ 0.98
DDB1-215ENST00000539712 GTF2IP78347 998 aa21.15■□□□□ 0.98
DDB1-215ENST00000539712 ANGEL2Q5VTE6 544 aaKnown RBP21.15■□□□□ 0.98
DDB1-215ENST00000539712 CNNM1Q9NRU3 951 aa21.15■□□□□ 0.98
DDB1-215ENST00000539712 THSD7BQ9C0I4 1608 aa21.15■□□□□ 0.98
DDB1-215ENST00000539712 MYO3BQ8WXR4 1341 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 PLIN1O60240 522 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 IL1R1P14778 569 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 NBPF9Q3BBW0 867 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
DDB1-215ENST00000539712 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
DDB1-215ENST00000539712 ECE1P42892 770 aa21.13■□□□□ 0.97
DDB1-215ENST00000539712 RARSP54136 660 aaKnown RBP21.13■□□□□ 0.97
DDB1-215ENST00000539712 FBXW7Q969H0 707 aa21.13■□□□□ 0.97
DDB1-215ENST00000539712 AOC2O75106 756 aa21.12■□□□□ 0.97
DDB1-215ENST00000539712 LRRC24Q50LG9 513 aa21.12■□□□□ 0.97
DDB1-215ENST00000539712 SULF1Q8IWU6 871 aa21.12■□□□□ 0.97
DDB1-215ENST00000539712 ZBED3Q96IU2 234 aaPredicted RBP21.12■□□□□ 0.97
DDB1-215ENST00000539712 SCAF8Q9UPN6 1271 aaKnown RBP21.12■□□□□ 0.97
DDB1-215ENST00000539712 PITPNM2Q9BZ72 1349 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 WNT10BO00744 389 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 GRM1Q13255 1194 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 UBE4AQ14139 1066 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
DDB1-215ENST00000539712 PAXIP1Q6ZW49 1069 aaPredicted RBP21.11■□□□□ 0.97
DDB1-215ENST00000539712 KIAA0825Q8IV33 1275 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 CDCA5Q96FF9 252 aa21.11■□□□□ 0.97
DDB1-215ENST00000539712 RFX5P48382 616 aaPredicted RBP21.1■□□□□ 0.97
DDB1-215ENST00000539712 MMP14P50281 582 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 HUNKP57058 714 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 MAP2K1Q02750 393 aaPredicted RBP21.1■□□□□ 0.97
DDB1-215ENST00000539712 ZNF804AQ7Z570 1209 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 OGFOD1Q8N543 542 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 VGLL2Q8N8G2 317 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 KLHDC4Q8TBB5 520 aa21.1■□□□□ 0.97
DDB1-215ENST00000539712 GBA2Q9HCG7 927 aaPredicted RBP21.1■□□□□ 0.97
DDB1-215ENST00000539712 MAP2K2P36507 400 aa21.09■□□□□ 0.97
DDB1-215ENST00000539712 FAM84BQ96KN1 310 aaPredicted RBP21.09■□□□□ 0.97
DDB1-215ENST00000539712 ZIC5Q96T25 663 aa21.09■□□□□ 0.97
DDB1-215ENST00000539712 MROH5Q6ZUA9 1318 aa21.08■□□□□ 0.97
DDB1-215ENST00000539712 SASH1O94885 1247 aa21.08■□□□□ 0.97
DDB1-215ENST00000539712 GYG1P46976 350 aa21.08■□□□□ 0.97
DDB1-215ENST00000539712 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
DDB1-215ENST00000539712 TDRD7Q8NHU6 1098 aaKnown RBP21.08■□□□□ 0.97
DDB1-215ENST00000539712 FAM155AB1AL88 458 aaPredicted RBP21.07■□□□□ 0.96
DDB1-215ENST00000539712 FKBP1AP62942 108 aaKnown RBP21.07■□□□□ 0.96
DDB1-215ENST00000539712 C2orf69Q8N8R5 385 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms