RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DDX46Q7L014 1031 aaKnown RBP12.14□□□□□ -0.47
SPARC-209ENST00000539687 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
SPARC-209ENST00000539687 GJD4Q96KN9 370 aaPredicted RBP12.14□□□□□ -0.47
SPARC-209ENST00000539687 PUS3Q9BZE2 481 aaKnown RBP12.14□□□□□ -0.47
SPARC-209ENST00000539687 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
SPARC-209ENST00000539687 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
SPARC-209ENST00000539687 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
SPARC-209ENST00000539687 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
SPARC-209ENST00000539687 NTSR2O95665 410 aa12.13□□□□□ -0.47
SPARC-209ENST00000539687 ARAP2Q8WZ64 1704 aa12.12□□□□□ -0.47
SPARC-209ENST00000539687 BAG4O95429 457 aaKnown RBP12.12□□□□□ -0.47
SPARC-209ENST00000539687 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
SPARC-209ENST00000539687 APPBP2Q92624 585 aa12.12□□□□□ -0.47
SPARC-209ENST00000539687 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
SPARC-209ENST00000539687 SMC3Q9UQE7 1217 aa12.12□□□□□ -0.47
SPARC-209ENST00000539687 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 KCNQ2O43526 872 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 BRD1O95696 1058 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 PDCP20941 246 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPARC-209ENST00000539687 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 ZNF589Q86UQ0 364 aaPredicted RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
SPARC-209ENST00000539687 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
SPARC-209ENST00000539687 BTAF1O14981 1849 aa12.1□□□□□ -0.47
SPARC-209ENST00000539687 IGSF3O75054 1194 aa12.1□□□□□ -0.47
SPARC-209ENST00000539687 ZPR1O75312 459 aa12.1□□□□□ -0.47
SPARC-209ENST00000539687 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
SPARC-209ENST00000539687 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
SPARC-209ENST00000539687 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
SPARC-209ENST00000539687 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
SPARC-209ENST00000539687 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
SPARC-209ENST00000539687 DDX60Q8IY21 1712 aaKnown RBP12.09□□□□□ -0.47
SPARC-209ENST00000539687 MBD3O95983 291 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 FGFR2P21802 821 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
SPARC-209ENST00000539687 ADORA1P30542 326 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 KLHL40Q2TBA0 621 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
SPARC-209ENST00000539687 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 MAST3O60307 1309 aa12.09□□□□□ -0.47
SPARC-209ENST00000539687 LY75O60449 1722 aa12.08□□□□□ -0.47
SPARC-209ENST00000539687 NCLP19338 710 aaKnown RBP12.08□□□□□ -0.48
SPARC-209ENST00000539687 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
SPARC-209ENST00000539687 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 ADCK5Q3MIX3 580 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 DEFB132Q7Z7B7 95 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 SETDB2Q96T68 719 aa12.08□□□□□ -0.48
SPARC-209ENST00000539687 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
SPARC-209ENST00000539687 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
SPARC-209ENST00000539687 GNPATO15228 680 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
SPARC-209ENST00000539687 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
SPARC-209ENST00000539687 ZAP70P43403 619 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 FGD1P98174 961 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 UBE4AQ14139 1066 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 SLC27A3Q5K4L6 730 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 NOL8Q76FK4 1167 aaKnown RBP12.07□□□□□ -0.48
SPARC-209ENST00000539687 DHX32Q7L7V1 743 aaKnown RBP12.07□□□□□ -0.48
SPARC-209ENST00000539687 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 FBXL16Q8N461 479 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 NLRP3Q96P20 1036 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
SPARC-209ENST00000539687 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 SEMA3EO15041 775 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 CYP21A2P08686 494 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 GNAT2P19087 354 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 ADD2P35612 726 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 MCAMP43121 646 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 SF3B2Q13435 895 aaKnown RBP12.06□□□□□ -0.48
SPARC-209ENST00000539687 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 LLPHQ9BRT6 129 aaKnown RBP12.06□□□□□ -0.48
SPARC-209ENST00000539687 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
SPARC-209ENST00000539687 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
SPARC-209ENST00000539687 ZMYM6O95789 1325 aa12.06□□□□□ -0.48
SPARC-209ENST00000539687 GOLGA6L3A6NEY3 463 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 STX6O43752 255 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
SPARC-209ENST00000539687 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
SPARC-209ENST00000539687 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 SPATA5Q8NB90 893 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 SYAP1Q96A49 352 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms