RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 FGFR2P21802 821 aa15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 ZNRF3Q9ULT6 936 aa15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 PCDHB15Q9Y5E8 787 aa15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
TSPAN9-207ENST00000539631 HMMRO75330 724 aa15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 SASH1O94885 1247 aa15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 EIF6P56537 245 aaKnown RBP15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 TFCP2Q12800 502 aa15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 OS9Q13438 667 aaPredicted RBP15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 C15orf52Q6ZUT6 534 aaKnown RBP15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 ZNF526Q8TF50 670 aaPredicted RBP15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 EXOC6BQ9Y2D4 811 aa15.75■□□□□ 0.11
TSPAN9-207ENST00000539631 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
TSPAN9-207ENST00000539631 DDNO94850 711 aaPredicted RBP15.74■□□□□ 0.11
TSPAN9-207ENST00000539631 CXCL9Q07325 125 aa15.74■□□□□ 0.11
TSPAN9-207ENST00000539631 KCNQ5Q9NR82 932 aa15.74■□□□□ 0.11
TSPAN9-207ENST00000539631 MYH13Q9UKX3 1938 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 RAD17O75943 681 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 CENPBP07199 599 aaPredicted RBP15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 GYG1P46976 350 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 ATP2B3Q16720 1220 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 DPY19L2Q6NUT2 758 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 LPIN2Q92539 896 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 COA1Q9GZY4 146 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 GJA3Q9Y6H8 435 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
TSPAN9-207ENST00000539631 IFIT1P09914 478 aaKnown RBP15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 SLC5A1P13866 664 aa15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 TIMM10P62072 90 aa15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 CIAPIN1Q6FI81 312 aa15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 PODNQ7Z5L7 613 aa15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 FAM84BQ96KN1 310 aaPredicted RBP15.72■□□□□ 0.11
TSPAN9-207ENST00000539631 KDM2BQ8NHM5 1336 aa15.71■□□□□ 0.11
TSPAN9-207ENST00000539631 ZNF609O15014 1411 aa15.71■□□□□ 0.11
TSPAN9-207ENST00000539631 HIBADHP31937 336 aaKnown RBP15.71■□□□□ 0.11
TSPAN9-207ENST00000539631 ZNF804AQ7Z570 1209 aa15.71■□□□□ 0.11
TSPAN9-207ENST00000539631 A0A1B0GUL7 405 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 APBB1O00213 710 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 PSMD14O00487 310 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 ADORA1P30542 326 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 BCAMP50895 628 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 AAMPQ13685 434 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 TNIP1Q15025 636 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 FBXO33Q7Z6M2 555 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 GPC2Q8N158 579 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 SCN4AP35499 1836 aa15.7■□□□□ 0.1
TSPAN9-207ENST00000539631 IL1R1P14778 569 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 TNNI3KQ59H18 835 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 FBXW7Q969H0 707 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 RRAGCQ9HB90 399 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 GPBP1L1Q9HC44 474 aaPredicted RBP15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 NMRK2Q9NPI5 230 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 FPGT-TNNI3KV9GXZ4 949 aa15.69■□□□□ 0.1
TSPAN9-207ENST00000539631 USP17L3A6NCW0 530 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 USP17L4A6NCW7 530 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 GTF2IP78347 998 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 USP17L1Q7RTZ2 530 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 VPS37DQ86XT2 251 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 RHPN1Q8TCX5 695 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 XAGE2Q96GT9 111 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 DCTPP1Q9H773 170 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 IL1RAPL2Q9NP60 686 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 GPR108Q9NPR9 543 aa15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 IQSEC3Q9UPP2 1182 aaPredicted RBP15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
TSPAN9-207ENST00000539631 POTECB2RU33 542 aa15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 VIL1P09327 827 aaKnown RBP15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 L3MBTL3Q96JM7 780 aaPredicted RBP15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 MXD3Q9BW11 206 aa15.67■□□□□ 0.1
TSPAN9-207ENST00000539631 PHKA1P46020 1223 aa15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 SCNN1DP51172 638 aa15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 DACT2Q5SW24 774 aa15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 STRIP1Q5VSL9 837 aa15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 RSBN1LQ6PCB5 846 aaPredicted RBP15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 EAF2Q96CJ1 260 aaPredicted RBP15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 CCDC8Q9H0W5 538 aaPredicted RBP15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
TSPAN9-207ENST00000539631 HDAC1Q13547 482 aaPredicted RBP15.65■□□□□ 0.1
TSPAN9-207ENST00000539631 CCDC102BQ68D86 513 aa15.65■□□□□ 0.1
TSPAN9-207ENST00000539631 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
TSPAN9-207ENST00000539631 BCL11AQ9H165 835 aa15.65■□□□□ 0.1
TSPAN9-207ENST00000539631 TLR7Q9NYK1 1049 aaKnown RBP15.65■□□□□ 0.1
TSPAN9-207ENST00000539631 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 FRAT2O75474 233 aaPredicted RBP15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 VEGFAP15692 232 aaPredicted RBP15.64■□□□□ 0.09
TSPAN9-207ENST00000539631 EPS15P42566 896 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms