RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SCNN1DP51172 638 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 POLA2Q14181 598 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 CEP85Q6P2H3 762 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 DDX19BQ9UMR2 479 aa19.63■□□□□ 0.73
RPAIN-206ENST00000539417 CIAO1O76071 339 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 POTEIP0CG38 1075 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 POTEJP0CG39 1038 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 VEGFAP15692 232 aaPredicted RBP19.61■□□□□ 0.73
RPAIN-206ENST00000539417 FGFR2P21802 821 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 GMPSP49915 693 aaPredicted RBP19.61■□□□□ 0.73
RPAIN-206ENST00000539417 UBE4AQ14139 1066 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 C15orf52Q6ZUT6 534 aaKnown RBP19.61■□□□□ 0.73
RPAIN-206ENST00000539417 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 MXD3Q9BW11 206 aa19.61■□□□□ 0.73
RPAIN-206ENST00000539417 G3V3G9 751 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 EPS15P42566 896 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 GYG1P46976 350 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 DCAF8Q5TAQ9 597 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 SIRT2Q8IXJ6 389 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 CD209Q9NNX6 404 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 PSME4Q14997 1843 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 COA1Q9GZY4 146 aa19.6■□□□□ 0.73
RPAIN-206ENST00000539417 IL15P40933 162 aaPredicted RBP19.59■□□□□ 0.73
RPAIN-206ENST00000539417 PODNQ7Z5L7 613 aa19.59■□□□□ 0.73
RPAIN-206ENST00000539417 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
RPAIN-206ENST00000539417 TAF1DQ9H5J8 278 aaPredicted RBP19.59■□□□□ 0.73
RPAIN-206ENST00000539417 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
RPAIN-206ENST00000539417 SCN4AP35499 1836 aa19.58■□□□□ 0.73
RPAIN-206ENST00000539417 SASH1O94885 1247 aa19.58■□□□□ 0.72
RPAIN-206ENST00000539417 VIL1P09327 827 aaKnown RBP19.58■□□□□ 0.72
RPAIN-206ENST00000539417 TFCP2Q12800 502 aa19.58■□□□□ 0.72
RPAIN-206ENST00000539417 TNIP1Q15025 636 aa19.58■□□□□ 0.72
RPAIN-206ENST00000539417 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
RPAIN-206ENST00000539417 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
RPAIN-206ENST00000539417 GPRC5DQ9NZD1 345 aa19.57■□□□□ 0.72
RPAIN-206ENST00000539417 HACL1Q9UJ83 578 aa19.57■□□□□ 0.72
RPAIN-206ENST00000539417 IL1R1P14778 569 aa19.56■□□□□ 0.72
RPAIN-206ENST00000539417 EPHX2P34913 555 aa19.56■□□□□ 0.72
RPAIN-206ENST00000539417 PUM3Q15397 648 aaKnown RBP19.56■□□□□ 0.72
RPAIN-206ENST00000539417 DACT2Q5SW24 774 aa19.56■□□□□ 0.72
RPAIN-206ENST00000539417 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
RPAIN-206ENST00000539417 CEP126Q9P2H0 1117 aa19.56■□□□□ 0.72
RPAIN-206ENST00000539417 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
RPAIN-206ENST00000539417 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
RPAIN-206ENST00000539417 USP17L3A6NCW0 530 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 USP17L4A6NCW7 530 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 EGFRP00533 1210 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 ADORA1P30542 326 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 BCAMP50895 628 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 GTF2IP78347 998 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 USP17L1Q7RTZ2 530 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 GMLQ99445 158 aa19.55■□□□□ 0.72
RPAIN-206ENST00000539417 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 HIBADHP31937 336 aaKnown RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 TIMM10P62072 90 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 ATP2B3Q16720 1220 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 RSBN1LQ6PCB5 846 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 ZNF804AQ7Z570 1209 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 CNOT7Q9UIV1 285 aaKnown RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 ADAMTSL1Q8N6G6 1762 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 TOMM70O94826 608 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 G3BP1Q13283 466 aaKnown RBP eCLIP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 TTLL5Q6EMB2 1281 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 CERS5Q8N5B7 392 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 TDRD7Q8NHU6 1098 aaKnown RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 LPIN2Q92539 896 aa19.54■□□□□ 0.72
RPAIN-206ENST00000539417 NOP58Q9Y2X3 529 aaKnown RBP19.54■□□□□ 0.72
RPAIN-206ENST00000539417 LMOD1P29536 600 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-206ENST00000539417 HIRAP54198 1017 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-206ENST00000539417 EAPPQ56P03 285 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-206ENST00000539417 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
RPAIN-206ENST00000539417 C16orf71Q8IYS4 520 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-206ENST00000539417 TRPM4Q8TD43 1214 aa19.53■□□□□ 0.72
RPAIN-206ENST00000539417 EXOC6BQ9Y2D4 811 aa19.53■□□□□ 0.72
RPAIN-206ENST00000539417 ARAP2Q8WZ64 1704 aa19.52■□□□□ 0.72
RPAIN-206ENST00000539417 IFIT1P09914 478 aaKnown RBP19.52■□□□□ 0.72
RPAIN-206ENST00000539417 SLC5A1P13866 664 aa19.52■□□□□ 0.72
RPAIN-206ENST00000539417 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
RPAIN-206ENST00000539417 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
RPAIN-206ENST00000539417 RPAP2Q8IXW5 612 aaPredicted RBP19.52■□□□□ 0.72
RPAIN-206ENST00000539417 A0A1B0GUL7 405 aa19.51■□□□□ 0.71
RPAIN-206ENST00000539417 DPF2Q92785 391 aa19.51■□□□□ 0.71
RPAIN-206ENST00000539417 PCDHB15Q9Y5E8 787 aa19.51■□□□□ 0.71
RPAIN-206ENST00000539417 COL1A1P02452 1464 aaPredicted RBP19.51■□□□□ 0.71
RPAIN-206ENST00000539417 ZNF609O15014 1411 aa19.51■□□□□ 0.71
RPAIN-206ENST00000539417 PHKA1P46020 1223 aa19.5■□□□□ 0.71
RPAIN-206ENST00000539417 GRIK5Q16478 980 aa19.5■□□□□ 0.71
RPAIN-206ENST00000539417 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
RPAIN-206ENST00000539417 RBM46Q8TBY0 533 aaKnown RBP19.5■□□□□ 0.71
RPAIN-206ENST00000539417 ADARB2Q9NS39 739 aaKnown RBP19.5■□□□□ 0.71
RPAIN-206ENST00000539417 RPS12P25398 132 aaKnown RBP19.49■□□□□ 0.71
RPAIN-206ENST00000539417 CAVIN4Q5BKX8 364 aa19.49■□□□□ 0.71
RPAIN-206ENST00000539417 RBM26Q5T8P6 1007 aaKnown RBP19.49■□□□□ 0.71
RPAIN-206ENST00000539417 AGBL3Q8NEM8 1001 aa19.49■□□□□ 0.71
RPAIN-206ENST00000539417 XAGE2Q96GT9 111 aa19.49■□□□□ 0.71
RPAIN-206ENST00000539417 CHAF1AQ13111 956 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms