RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 DACT1Q9NYF0 836 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 WDR17Q8IZU2 1322 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 ZC3H6P61129 1189 aaKnown RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 C17orf53Q8N3J3 647 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 VGLL2Q8N8G2 317 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 ZNF274Q96GC6 653 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 SCN7AQ01118 1682 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 CCDC192P0DO97 292 aa8.21□□□□□ -1.09
PROM1-219ENST00000539194 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.09
PROM1-219ENST00000539194 NEXNQ0ZGT2 675 aa8.21□□□□□ -1.09
PROM1-219ENST00000539194 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.09
PROM1-219ENST00000539194 DHX40Q8IX18 779 aaKnown RBP8.21□□□□□ -1.09
PROM1-219ENST00000539194 FBXO3Q9UK99 471 aa8.21□□□□□ -1.09
PROM1-219ENST00000539194 DOT1LQ8TEK3 1739 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 WDR19Q8NEZ3 1342 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 M0R2C6 588 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 PDIA3P30101 505 aaKnown RBP8.21□□□□□ -1.1
PROM1-219ENST00000539194 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 ATL3Q6DD88 541 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 TTLL7Q6ZT98 887 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 BRF1Q92994 677 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 ZNF512BQ96KM6 892 aaPredicted RBP8.21□□□□□ -1.1
PROM1-219ENST00000539194 A0A087WZG4 1122 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 E7EWF7 191 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 RBM6P78332 1123 aaKnown RBP8.21□□□□□ -1.1
PROM1-219ENST00000539194 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 LUZP1Q86V48 1076 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 CCDC191Q8NCU4 936 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.1
PROM1-219ENST00000539194 HMGB1P09429 215 aaKnown RBP8.2□□□□□ -1.1
PROM1-219ENST00000539194 ZNF75DP51815 510 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 LRRC24Q50LG9 513 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 NUP62CLQ9H1M0 184 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 PAG1Q9NWQ8 432 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
PROM1-219ENST00000539194 ANTXR2P58335 489 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 FERMT3Q86UX7 667 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 MB21D2Q8IYB1 491 aaPredicted RBP8.2□□□□□ -1.1
PROM1-219ENST00000539194 OSBP2Q969R2 916 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 MAP7D2Q96T17 732 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 HSD3B7Q9H2F3 369 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 CACNA1SQ13698 1873 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
PROM1-219ENST00000539194 CCDC144BQ3MJ40 725 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 ANO6Q4KMQ2 910 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
PROM1-219ENST00000539194 FMR1NBQ8N0W7 255 aaPredicted RBP8.2□□□□□ -1.1
PROM1-219ENST00000539194 PCDH11XQ9BZA7 1347 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 PCDH11YQ9BZA8 1340 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 FAM237AA0A1B0GTK4 181 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 EYA2O00167 538 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
PROM1-219ENST00000539194 IL15P40933 162 aaPredicted RBP8.19□□□□□ -1.1
PROM1-219ENST00000539194 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 PRDM4Q9UKN5 801 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 MYH2Q9UKX2 1941 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 CAVIN2O95810 425 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 TPM3P06753 285 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 C11orf57Q6ZUT1 292 aaPredicted RBP8.19□□□□□ -1.1
PROM1-219ENST00000539194 DDX46Q7L014 1031 aaKnown RBP8.19□□□□□ -1.1
PROM1-219ENST00000539194 FTOQ9C0B1 505 aaKnown RBP eCLIP8.19□□□□□ -1.1
PROM1-219ENST00000539194 NRBP1Q9UHY1 535 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 LAMB1P07942 1786 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 ZSCAN25Q6NSZ9 544 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 BPIFA3Q9BQP9 254 aa8.19□□□□□ -1.1
PROM1-219ENST00000539194 TFIP11Q9UBB9 837 aaKnown RBP8.19□□□□□ -1.1
PROM1-219ENST00000539194 MYH14Q7Z406 1995 aaKnown RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 TIMM10P62072 90 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 SCARF1Q14162 830 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 SYCP1Q15431 976 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 PROSER2Q86WR7 435 aaPredicted RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 MRFAP1L1Q96HT8 127 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 PUS3Q9BZE2 481 aaKnown RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 RTEL1Q9NZ71 1219 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 RNF113AO15541 343 aaKnown RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 USP28Q96RU2 1077 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 RIPOR2Q9Y4F9 1068 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 MYH6P13533 1939 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 TCRBV5S4A2TA0A5A2 114 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 PTPDC1A2A3K4 754 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 CAMK4Q16566 473 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 BRINP3Q76B58 766 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 MTERF4Q7Z6M4 381 aaKnown RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 CWC25Q9NXE8 425 aaPredicted RBP8.18□□□□□ -1.1
PROM1-219ENST00000539194 ZMYM6O95789 1325 aa8.18□□□□□ -1.1
PROM1-219ENST00000539194 A0A1B0GUL7 405 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 A0A1W2PQ27 194 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 A0A1W2PQ64 194 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 A0A1W2PQD8 194 aa8.17□□□□□ -1.1
PROM1-219ENST00000539194 PTGS1P23219 599 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms