RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ADORA1P30542 326 aa18.73■□□□□ 0.59
VAMP1-207ENST00000539047 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
VAMP1-207ENST00000539047 DNAJC2Q99543 621 aaKnown RBP18.73■□□□□ 0.59
VAMP1-207ENST00000539047 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
VAMP1-207ENST00000539047 ATP2B4P23634 1241 aa18.72■□□□□ 0.59
VAMP1-207ENST00000539047 LRRFIP1Q32MZ4 808 aaKnown RBP18.72■□□□□ 0.59
VAMP1-207ENST00000539047 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
VAMP1-207ENST00000539047 HAUS7Q99871 368 aa18.72■□□□□ 0.59
VAMP1-207ENST00000539047 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
VAMP1-207ENST00000539047 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-207ENST00000539047 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-207ENST00000539047 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
VAMP1-207ENST00000539047 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
VAMP1-207ENST00000539047 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
VAMP1-207ENST00000539047 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
VAMP1-207ENST00000539047 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
VAMP1-207ENST00000539047 CCDC102BQ68D86 513 aa18.7■□□□□ 0.58
VAMP1-207ENST00000539047 DIAPH3Q9NSV4 1193 aa18.7■□□□□ 0.58
VAMP1-207ENST00000539047 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
VAMP1-207ENST00000539047 AKAP11Q9UKA4 1901 aa18.7■□□□□ 0.58
VAMP1-207ENST00000539047 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
VAMP1-207ENST00000539047 UFL1O94874 794 aa18.69■□□□□ 0.58
VAMP1-207ENST00000539047 ARID4AP29374 1257 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-207ENST00000539047 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-207ENST00000539047 PRPF40BQ6NWY9 871 aaKnown RBP18.69■□□□□ 0.58
VAMP1-207ENST00000539047 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
VAMP1-207ENST00000539047 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
VAMP1-207ENST00000539047 PAG1Q9NWQ8 432 aa18.69■□□□□ 0.58
VAMP1-207ENST00000539047 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
VAMP1-207ENST00000539047 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 CHRNA5P30532 468 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 TGFB2P61812 414 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 GPSM2P81274 684 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
VAMP1-207ENST00000539047 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 ZNF804AQ7Z570 1209 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
VAMP1-207ENST00000539047 DOCK2Q92608 1830 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 GOLIM4O00461 696 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 SEMA3EO15041 775 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-207ENST00000539047 PHKA1P46020 1223 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 DPP8Q6V1X1 898 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-207ENST00000539047 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
VAMP1-207ENST00000539047 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 MPNDQ8N594 471 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 EYA3Q99504 573 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
VAMP1-207ENST00000539047 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.58
VAMP1-207ENST00000539047 CD2APQ9Y5K6 639 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
VAMP1-207ENST00000539047 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
VAMP1-207ENST00000539047 REC8O95072 547 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 YY1P25490 414 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 HIBADHP31937 336 aaKnown RBP18.65■□□□□ 0.58
VAMP1-207ENST00000539047 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
VAMP1-207ENST00000539047 KBTBD3Q8NAB2 608 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 DENND2AQ9ULE3 1009 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
VAMP1-207ENST00000539047 SNAP23O00161 211 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 CHMLP26374 656 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 MCAMP43121 646 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 GYG1P46976 350 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 BCAMP50895 628 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
VAMP1-207ENST00000539047 SPATA5Q8NB90 893 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 SUPT20HQ8NEM7 779 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.57
VAMP1-207ENST00000539047 G3V3G9 751 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 DPEP1P16444 411 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 DCAF8Q5TAQ9 597 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 TBC1D16Q8TBP0 767 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 PIM2Q9P1W9 311 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 RAD50Q92878 1312 aa18.63■□□□□ 0.57
VAMP1-207ENST00000539047 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
VAMP1-207ENST00000539047 ZAP70P43403 619 aa18.62■□□□□ 0.57
VAMP1-207ENST00000539047 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
VAMP1-207ENST00000539047 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
VAMP1-207ENST00000539047 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
VAMP1-207ENST00000539047 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
VAMP1-207ENST00000539047 UTRNP46939 3433 aa18.62■□□□□ 0.57
VAMP1-207ENST00000539047 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 SCARF1Q14162 830 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
VAMP1-207ENST00000539047 ESYT1Q9BSJ8 1104 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 ZC3H12CQ9C0D7 883 aaKnown RBP18.61■□□□□ 0.57
VAMP1-207ENST00000539047 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
VAMP1-207ENST00000539047 MYO5AQ9Y4I1 1855 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms