RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 DACT2Q5SW24 774 aa18.26■□□□□ 0.51
PBX3-212ENST00000538998 ARMC9Q7Z3E5 817 aa18.26■□□□□ 0.51
PBX3-212ENST00000538998 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
PBX3-212ENST00000538998 ALDH1A1P00352 501 aa18.25■□□□□ 0.51
PBX3-212ENST00000538998 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
PBX3-212ENST00000538998 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
PBX3-212ENST00000538998 APOBEC3FQ8IUX4 373 aaKnown RBP18.24■□□□□ 0.51
PBX3-212ENST00000538998 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
PBX3-212ENST00000538998 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
PBX3-212ENST00000538998 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
PBX3-212ENST00000538998 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
PBX3-212ENST00000538998 CTSWP56202 376 aa18.23■□□□□ 0.51
PBX3-212ENST00000538998 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
PBX3-212ENST00000538998 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
PBX3-212ENST00000538998 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
PBX3-212ENST00000538998 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
PBX3-212ENST00000538998 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
PBX3-212ENST00000538998 MINPP1Q9UNW1 487 aa18.23■□□□□ 0.51
PBX3-212ENST00000538998 SASH1O94885 1247 aa18.22■□□□□ 0.51
PBX3-212ENST00000538998 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
PBX3-212ENST00000538998 LDLRAD1Q5T700 205 aa18.22■□□□□ 0.51
PBX3-212ENST00000538998 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
PBX3-212ENST00000538998 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
PBX3-212ENST00000538998 MYBBP1AQ9BQG0 1328 aaKnown RBP18.22■□□□□ 0.51
PBX3-212ENST00000538998 COL1A1P02452 1464 aaPredicted RBP18.21■□□□□ 0.51
PBX3-212ENST00000538998 MANSC4A6NHS7 340 aaPredicted RBP18.21■□□□□ 0.51
PBX3-212ENST00000538998 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
PBX3-212ENST00000538998 INHBEP58166 350 aa18.21■□□□□ 0.51
PBX3-212ENST00000538998 PRKG1Q13976 671 aa18.21■□□□□ 0.51
PBX3-212ENST00000538998 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
PBX3-212ENST00000538998 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
PBX3-212ENST00000538998 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
PBX3-212ENST00000538998 TTLL11Q8NHH1 800 aa18.2■□□□□ 0.5
PBX3-212ENST00000538998 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
PBX3-212ENST00000538998 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
PBX3-212ENST00000538998 ZBTB48P10074 688 aaPredicted RBP18.19■□□□□ 0.5
PBX3-212ENST00000538998 HABP4Q5JVS0 413 aaKnown RBP18.19■□□□□ 0.5
PBX3-212ENST00000538998 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
PBX3-212ENST00000538998 TRIM17Q9Y577 477 aa18.19■□□□□ 0.5
PBX3-212ENST00000538998 ZNF646O15015 1829 aaPredicted RBP18.19■□□□□ 0.5
PBX3-212ENST00000538998 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
PBX3-212ENST00000538998 GNAI1P63096 354 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
PBX3-212ENST00000538998 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 OTOP1Q7RTM1 612 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 KIAA0825Q8IV33 1275 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 SLC10A4Q96EP9 437 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
PBX3-212ENST00000538998 GREM2Q9H772 168 aa18.18■□□□□ 0.5
PBX3-212ENST00000538998 IGHMBP2P38935 993 aaKnown RBP18.17■□□□□ 0.5
PBX3-212ENST00000538998 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
PBX3-212ENST00000538998 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
PBX3-212ENST00000538998 ADAMTS8Q9UP79 889 aa18.17■□□□□ 0.5
PBX3-212ENST00000538998 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
PBX3-212ENST00000538998 UNCXA6NJT0 531 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 TXNRD3Q86VQ6 643 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 ANKRD2Q9GZV1 360 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 DEFB129Q9H1M3 183 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 PPP2R3BQ9Y5P8 575 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 ZNF804BA4D1E1 1349 aa18.16■□□□□ 0.5
PBX3-212ENST00000538998 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
PBX3-212ENST00000538998 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
PBX3-212ENST00000538998 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
PBX3-212ENST00000538998 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
PBX3-212ENST00000538998 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
PBX3-212ENST00000538998 GTF2IP78347 998 aa18.14■□□□□ 0.49
PBX3-212ENST00000538998 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
PBX3-212ENST00000538998 OTUD7BQ6GQQ9 843 aa18.14■□□□□ 0.49
PBX3-212ENST00000538998 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
PBX3-212ENST00000538998 FZD1Q9UP38 647 aa18.14■□□□□ 0.49
PBX3-212ENST00000538998 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 C8orf58Q8NAV2 365 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 MTMR14Q8NCE2 650 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 PTPN22Q9Y2R2 807 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 SPEF2Q9C093 1822 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 SSC5DA1L4H1 1573 aa18.13■□□□□ 0.49
PBX3-212ENST00000538998 KLRK1P26718 216 aa18.12■□□□□ 0.49
PBX3-212ENST00000538998 KCNJ4P48050 445 aa18.12■□□□□ 0.49
PBX3-212ENST00000538998 ARMC5Q96C12 935 aa18.12■□□□□ 0.49
PBX3-212ENST00000538998 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
PBX3-212ENST00000538998 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
PBX3-212ENST00000538998 MYH3P11055 1940 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 NEURL1BA8MQ27 555 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 MYO1BO43795 1136 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 ITGA6P23229 1130 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 CWF19L2Q2TBE0 894 aaKnown RBP18.11■□□□□ 0.49
PBX3-212ENST00000538998 SUPT20HL1Q3ZLR7 823 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 CD99L2Q8TCZ2 262 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
PBX3-212ENST00000538998 LAMB1P07942 1786 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 RBBP6Q7Z6E9 1792 aaKnown RBP18.11■□□□□ 0.49
PBX3-212ENST00000538998 HTTP42858 3142 aa18.11■□□□□ 0.49
PBX3-212ENST00000538998 H7C1W4 665 aa18.1■□□□□ 0.49
PBX3-212ENST00000538998 IREB2P48200 963 aaKnown RBP18.1■□□□□ 0.49
PBX3-212ENST00000538998 CRHR2Q13324 411 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms