RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 PPIP5K2O43314 1243 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 GRIN3BO60391 1043 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 GYG1P46976 350 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 TTC39AQ5SRH9 613 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 TAOK3Q9H2K8 898 aa10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 ZNF277Q9NRM2 450 aaPredicted RBP10.55□□□□□ -0.72
LPCAT3-208ENST00000538987 YBX3P16989 372 aaKnown RBP eCLIP10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 FGFR2P21802 821 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 ADORA1P30542 326 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 HIBADHP31937 336 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 BCAMP50895 628 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 AOC3Q16853 763 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 DOK7Q18PE1 504 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 PSMD1Q99460 953 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 GNL3LQ9NVN8 582 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 TLR7Q9NYK1 1049 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 LRP5O75197 1615 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 SLX4Q8IY92 1834 aa10.54□□□□□ -0.72
LPCAT3-208ENST00000538987 KLRK1P26718 216 aa10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 IARSP41252 1262 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 RASSF7Q02833 373 aa10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 JDP2Q8WYK2 163 aa10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 FAM84BQ96KN1 310 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 RTFDC1Q9BY42 306 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 DBNLQ9UJU6 430 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-208ENST00000538987 NFKBIEO00221 500 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 MX1P20591 662 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 RGS3P49796 1198 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 COA1Q9GZY4 146 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 VPS33BQ9H267 617 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 DBNDD1Q9H9R9 158 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 MED23Q9ULK4 1368 aa10.52□□□□□ -0.73
LPCAT3-208ENST00000538987 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 ERC2O15083 957 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 UQCRFS1P1P0C7P4 283 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 PHKA1P46020 1223 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 C15orf52Q6ZUT6 534 aaKnown RBP10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 FBXO33Q7Z6M2 555 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 NIM1KQ8IY84 436 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 OTUD7AQ8TE49 926 aaPredicted RBP10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 CD209Q9NNX6 404 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 DLEC1Q9Y238 1755 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
LPCAT3-208ENST00000538987 ZNF609O15014 1411 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 ECE2O60344 883 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 LMNB1P20700 586 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 PDE4AP27815 886 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 TSHZ3Q63HK5 1081 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 PODNQ7Z5L7 613 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 SKAP1Q86WV1 359 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 DNAJC2Q99543 621 aaKnown RBP10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 BOLA2Q9H3K6 86 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 SNRKQ9NRH2 765 aa10.5□□□□□ -0.73
LPCAT3-208ENST00000538987 ATP5JP18859 108 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 PDE1AP54750 535 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 GTF2IP78347 998 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 PLEKHM2Q8IWE5 1019 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 RNF181Q9P0P0 153 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 DENND2AQ9ULE3 1009 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 JAG2Q9Y219 1238 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 LTBP3Q9NS15 1303 aa10.49□□□□□ -0.73
LPCAT3-208ENST00000538987 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 SEMA3EO15041 775 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 MAP4K4O95819 1239 aaPredicted RBP10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 IL1R1P14778 569 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 TDRD7Q8NHU6 1098 aaKnown RBP10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 STAP2Q9UGK3 403 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 ZNRF3Q9ULT6 936 aa10.48□□□□□ -0.73
LPCAT3-208ENST00000538987 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 RAD17O75943 681 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 MCAMP43121 646 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 ZAP70P43403 619 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 RASGRF1Q13972 1273 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 SCARF1Q14162 830 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 WDR66Q8TBY9 1149 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
LPCAT3-208ENST00000538987 ZNF512BQ96KM6 892 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms