RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 IFT57Q9NWB7 429 aa18.08■□□□□ 0.48
SMARCA4-206ENST00000538456 MED23Q9ULK4 1368 aa18.07■□□□□ 0.48
SMARCA4-206ENST00000538456 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-206ENST00000538456 PCDH10Q9P2E7 1040 aa18.07■□□□□ 0.48
SMARCA4-206ENST00000538456 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
SMARCA4-206ENST00000538456 SASH1O94885 1247 aa18.06■□□□□ 0.48
SMARCA4-206ENST00000538456 GNAI1P63096 354 aa18.06■□□□□ 0.48
SMARCA4-206ENST00000538456 DACT2Q5SW24 774 aa18.06■□□□□ 0.48
SMARCA4-206ENST00000538456 OGFOD1Q8N543 542 aa18.06■□□□□ 0.48
SMARCA4-206ENST00000538456 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
SMARCA4-206ENST00000538456 APAF1O14727 1248 aa18.05■□□□□ 0.48
SMARCA4-206ENST00000538456 NF2P35240 595 aa18.05■□□□□ 0.48
SMARCA4-206ENST00000538456 GREM2Q9H772 168 aa18.05■□□□□ 0.48
SMARCA4-206ENST00000538456 MINPP1Q9UNW1 487 aa18.05■□□□□ 0.48
SMARCA4-206ENST00000538456 WNT10BO00744 389 aa18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 PRKG1Q13976 671 aa18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 PKN2Q16513 984 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 TTLL11Q8NHH1 800 aa18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 BSDC1Q9NW68 430 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-206ENST00000538456 PI4KAP2A4QPH2 592 aa18.03■□□□□ 0.48
SMARCA4-206ENST00000538456 IGKV5-2P06315 115 aa18.03■□□□□ 0.48
SMARCA4-206ENST00000538456 PI4KAP1Q8N8J0 262 aa18.03■□□□□ 0.48
SMARCA4-206ENST00000538456 MYO3BQ8WXR4 1341 aa18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 GPR25O00155 361 aa18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 STRIP1Q5VSL9 837 aa18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 TXNRD3Q86VQ6 643 aa18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
SMARCA4-206ENST00000538456 KLRK1P26718 216 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 TM4SF4P48230 202 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-206ENST00000538456 SREBF2Q12772 1141 aa18■□□□□ 0.47
SMARCA4-206ENST00000538456 ARMC9Q7Z3E5 817 aa18■□□□□ 0.47
SMARCA4-206ENST00000538456 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
SMARCA4-206ENST00000538456 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 FBXO46Q6PJ61 603 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 APOBEC3FQ8IUX4 373 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 R3HDMLQ9H3Y0 253 aa17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 ANGEL1Q9UNK9 670 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 FZD1Q9UP38 647 aa17.99■□□□□ 0.47
SMARCA4-206ENST00000538456 ZNF804BA4D1E1 1349 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 HTTP42858 3142 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 NEURL1BA8MQ27 555 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 FKTNO75072 461 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 GTF2IP78347 998 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 TSR2Q969E8 191 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 LEMD3Q9Y2U8 911 aa17.98■□□□□ 0.47
SMARCA4-206ENST00000538456 ITGA6P23229 1130 aa17.97■□□□□ 0.47
SMARCA4-206ENST00000538456 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-206ENST00000538456 ECM29Q5VYK3 1845 aa17.97■□□□□ 0.47
SMARCA4-206ENST00000538456 CENPFP49454 3210 aa17.97■□□□□ 0.47
SMARCA4-206ENST00000538456 KCNJ4P48050 445 aa17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 SPRYD7Q5W111 196 aa17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 G2E3Q7L622 706 aa17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 MPHOSPH8Q99549 860 aa17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-206ENST00000538456 H7C1W4 665 aa17.95■□□□□ 0.46
SMARCA4-206ENST00000538456 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
SMARCA4-206ENST00000538456 ANKRD2Q9GZV1 360 aa17.95■□□□□ 0.46
SMARCA4-206ENST00000538456 A0A1B0GUL6 1792 aa17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 ZBED3Q96IU2 234 aaPredicted RBP17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 DEFB129Q9H1M3 183 aa17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 SSC5DA1L4H1 1573 aa17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 COL1A1P02452 1464 aaPredicted RBP17.94■□□□□ 0.46
SMARCA4-206ENST00000538456 MMP14P50281 582 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 CHRNDQ07001 517 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 GCKRQ14397 625 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 DLGAP5Q15398 846 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
SMARCA4-206ENST00000538456 LAMB1P07942 1786 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 F8W031 263 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 SNAP23O00161 211 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 TWISTNBQ3B726 338 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 IFNL1Q8IU54 200 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 CERS5Q8N5B7 392 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 SLC10A4Q96EP9 437 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 CD209Q9NNX6 404 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
SMARCA4-206ENST00000538456 CLRN2A0PK11 232 aa17.91■□□□□ 0.46
SMARCA4-206ENST00000538456 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-206ENST00000538456 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
SMARCA4-206ENST00000538456 BRCA2P51587 3418 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms