RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ATG9AQ7Z3C6 839 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 TMEM57Q8N5G2 664 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 DPF2Q92785 391 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
SPARC-208ENST00000538026 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 ANKRD2Q9GZV1 360 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 PGAP2Q9UHJ9 254 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 LRRFIP2Q9Y608 721 aaKnown RBP10.58□□□□□ -0.72
SPARC-208ENST00000538026 ASTN2O75129 1339 aaPredicted RBP10.58□□□□□ -0.72
SPARC-208ENST00000538026 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
SPARC-208ENST00000538026 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
SPARC-208ENST00000538026 PODNQ7Z5L7 613 aa10.57□□□□□ -0.72
SPARC-208ENST00000538026 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
SPARC-208ENST00000538026 ADARB2Q9NS39 739 aaKnown RBP10.57□□□□□ -0.72
SPARC-208ENST00000538026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
SPARC-208ENST00000538026 ZNF609O15014 1411 aa10.57□□□□□ -0.72
SPARC-208ENST00000538026 TRAF5O00463 557 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 PLIN1O60240 522 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 APLP1P51693 650 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 ZNF280AP59817 542 aaPredicted RBP10.56□□□□□ -0.72
SPARC-208ENST00000538026 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
SPARC-208ENST00000538026 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
SPARC-208ENST00000538026 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 CERS5Q8N5B7 392 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 FAM84BQ96KN1 310 aaPredicted RBP10.56□□□□□ -0.72
SPARC-208ENST00000538026 COA1Q9GZY4 146 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 CNNM1Q9NRU3 951 aa10.56□□□□□ -0.72
SPARC-208ENST00000538026 PA2G4Q9UQ80 394 aaKnown RBP10.56□□□□□ -0.72
SPARC-208ENST00000538026 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
SPARC-208ENST00000538026 UBTFL1P0CB47 393 aaPredicted RBP10.55□□□□□ -0.72
SPARC-208ENST00000538026 FGFR2P21802 821 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
SPARC-208ENST00000538026 TBC1D10BQ4KMP7 808 aaPredicted RBP10.55□□□□□ -0.72
SPARC-208ENST00000538026 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
SPARC-208ENST00000538026 EYA2O00167 538 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
SPARC-208ENST00000538026 IL1R1P14778 569 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 RPS12P25398 132 aaKnown RBP10.54□□□□□ -0.72
SPARC-208ENST00000538026 GYG1P46976 350 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 MTX1Q13505 466 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 UBE4AQ14139 1066 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 GRIK5Q16478 980 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 STRIP1Q5VSL9 837 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 CST9Q5W186 159 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 FBXO33Q7Z6M2 555 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 AGBL3Q8NEM8 1001 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 PANK1Q8TE04 598 aa10.54□□□□□ -0.72
SPARC-208ENST00000538026 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 H7C1D1 291 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 PDE8BO95263 885 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 GTF2IP78347 998 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
SPARC-208ENST00000538026 TTLL5Q6EMB2 1281 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
SPARC-208ENST00000538026 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
SPARC-208ENST00000538026 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 JAG2Q9Y219 1238 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 AOX1Q06278 1338 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
SPARC-208ENST00000538026 G3V3G9 751 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 KCNJ4P48050 445 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 BCAMP50895 628 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 DCAF8Q5TAQ9 597 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
SPARC-208ENST00000538026 ZBED3Q96IU2 234 aaPredicted RBP10.52□□□□□ -0.73
SPARC-208ENST00000538026 SIL1Q9H173 461 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
SPARC-208ENST00000538026 SCAF8Q9UPN6 1271 aaKnown RBP10.52□□□□□ -0.73
SPARC-208ENST00000538026 GNAI2P04899 355 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 GNAI3P08754 354 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 NBPF9Q3BBW0 867 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 C20orf194Q5TEA3 1177 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 USP48Q86UV5 1035 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
SPARC-208ENST00000538026 KLRG1Q96E93 195 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 FAM205AQ6ZU69 1335 aa10.51□□□□□ -0.73
SPARC-208ENST00000538026 SRGAP3O43295 1099 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 CIAO1O76071 339 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 SASH1O94885 1247 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 ADORA1P30542 326 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
SPARC-208ENST00000538026 SCARF1Q14162 830 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 POLA2Q14181 598 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 KIF4BQ2VIQ3 1234 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 KIAA0825Q8IV33 1275 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 MYOZ2Q9NPC6 264 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 RCAN3Q9UKA8 241 aa10.5□□□□□ -0.73
SPARC-208ENST00000538026 IQSEC3Q9UPP2 1182 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms