RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 UBASH3BQ8TF42 649 aa8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 EREGO14944 169 aa8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 FZD6O60353 706 aa8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 SMNDC1O75940 238 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 SPACA7Q96KW9 195 aa8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
SRGAP1-203ENST00000537585 CES1P23141 567 aa8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 KLHDC7BQ96G42 594 aa8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 LATS2Q9NRM7 1088 aa8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
SRGAP1-203ENST00000537585 FSCN2O14926 492 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 GLB1P16278 677 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 CD68P34810 354 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 ARTNQ5T4W7 220 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 KIAA1211Q6ZU35 1233 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 TMEM130Q8N3G9 435 aa8.53□□□□□ -1.04
SRGAP1-203ENST00000537585 ABL1P00519 1130 aa8.52□□□□□ -1.05
SRGAP1-203ENST00000537585 NPR3P17342 541 aa8.52□□□□□ -1.05
SRGAP1-203ENST00000537585 TNFRSF21O75509 655 aa8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 ADAM19Q9H013 955 aa8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 SRA1Q9HD15 236 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-203ENST00000537585 PTPRAP18433 802 aa8.5□□□□□ -1.05
SRGAP1-203ENST00000537585 MAP4K3Q8IVH8 894 aa8.5□□□□□ -1.05
SRGAP1-203ENST00000537585 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
SRGAP1-203ENST00000537585 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
SRGAP1-203ENST00000537585 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
SRGAP1-203ENST00000537585 PDE2AO00408 941 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 POLR3DP05423 398 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 SERPINB4P48594 390 aa8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 NLRP12P59046 1061 aa8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 ECM1Q16610 540 aa8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 PEAR1Q5VY43 1037 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
SRGAP1-203ENST00000537585 METTL12A8MUP2 240 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 H3BRJ5 948 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 HYAL3O43820 417 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 FSTP19883 344 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 AAMPQ13685 434 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 SLC7A3Q8WY07 619 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 OSMRQ99650 979 aa8.48□□□□□ -1.05
SRGAP1-203ENST00000537585 PHACTR2O75167 634 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 LRP8Q14114 963 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 VN1R5Q7Z5H4 357 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 GJD3Q8N144 294 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 CACTIN-AS1Q8N1I8 211 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 ARID3AQ99856 593 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
SRGAP1-203ENST00000537585 DUOXA2Q1HG44 320 aa8.46□□□□□ -1.06
SRGAP1-203ENST00000537585 NXPE3Q969Y0 559 aa8.46□□□□□ -1.06
SRGAP1-203ENST00000537585 PCSK2P16519 638 aa8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 FKBP4Q02790 459 aaKnown RBP eCLIP8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 TMEM102Q8N9M5 508 aaPredicted RBP8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 KLHL23Q8NBE8 558 aa8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
SRGAP1-203ENST00000537585 SOX1O00570 391 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 FAM13AO94988 1023 aa8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 DLGAP3O95886 979 aa8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 PREPP48147 710 aa8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 FAM46AQ96IP4 442 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-203ENST00000537585 H3BRB1 525 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 SUPT5HO00267 1087 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 MED26O95402 600 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 ALKBH2Q6NS38 261 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 FAM117BQ6P1L5 589 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 TUT1Q9H6E5 874 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 RNF112Q9ULX5 631 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 RAXQ9Y2V3 346 aa8.43□□□□□ -1.06
SRGAP1-203ENST00000537585 HMX2A2RU54 273 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 SSTR4P31391 388 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 TTC16Q8NEE8 873 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 C7orf69Q9H7B7 122 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 ZFYVE28Q9HCC9 887 aa8.42□□□□□ -1.06
SRGAP1-203ENST00000537585 ICMTO60725 284 aa8.41□□□□□ -1.06
SRGAP1-203ENST00000537585 TGFB1P01137 390 aa8.41□□□□□ -1.06
SRGAP1-203ENST00000537585 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
SRGAP1-203ENST00000537585 TRIM42Q8IWZ5 723 aa8.41□□□□□ -1.06
SRGAP1-203ENST00000537585 CABP4P57796 275 aa8.4□□□□□ -1.06
SRGAP1-203ENST00000537585 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
SRGAP1-203ENST00000537585 BSNDQ8WZ55 320 aa8.4□□□□□ -1.06
SRGAP1-203ENST00000537585 MYRFLQ96LU7 910 aa8.4□□□□□ -1.06
SRGAP1-203ENST00000537585 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.06
SRGAP1-203ENST00000537585 STOML1Q9UBI4 398 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms