RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 Q6ZUG5 572 aa11.06□□□□□ -0.64
UBE3B-207ENST00000537063 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
UBE3B-207ENST00000537063 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
UBE3B-207ENST00000537063 TRMT112Q9UI30 125 aaKnown RBP11.06□□□□□ -0.64
UBE3B-207ENST00000537063 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 FGFR2P21802 821 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-207ENST00000537063 TAF7LQ5H9L4 462 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
UBE3B-207ENST00000537063 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 COL24A1Q17RW2 1714 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 PFKFB2O60825 505 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
UBE3B-207ENST00000537063 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
UBE3B-207ENST00000537063 ELP1O95163 1332 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 SYCE3A1L190 88 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 EVCP57679 992 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 APPBP2Q92624 585 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-207ENST00000537063 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 C4AP0C0L4 1744 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 C4BP0C0L5 1744 aa11.05□□□□□ -0.64
UBE3B-207ENST00000537063 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 E7EWF7 191 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 PDE8BO95263 885 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 MCAMP43121 646 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 ZAP70P43403 619 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 SIK1P57059 783 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 ITPK1Q13572 414 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 LARP1BQ659C4 914 aaKnown RBP11.04□□□□□ -0.64
UBE3B-207ENST00000537063 CDC37L1Q7L3B6 337 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 KAT6BQ8WYB5 2073 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-207ENST00000537063 RRAGDQ9NQL2 400 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-207ENST00000537063 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 COL4A1P02462 1669 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 PHF14O94880 888 aa11.04□□□□□ -0.64
UBE3B-207ENST00000537063 RGL2O15211 777 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE3B-207ENST00000537063 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
UBE3B-207ENST00000537063 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
UBE3B-207ENST00000537063 A0A0G2JLW4 131 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 WDR19Q8NEZ3 1342 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 NTSR2O95665 410 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 SCRN1Q12765 414 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 PUM3Q15397 648 aaKnown RBP11.03□□□□□ -0.64
UBE3B-207ENST00000537063 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 CHD4Q14839 1912 aa11.03□□□□□ -0.64
UBE3B-207ENST00000537063 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-207ENST00000537063 ADD2P35612 726 aa11.02□□□□□ -0.64
UBE3B-207ENST00000537063 ATP6V1AP38606 617 aa11.02□□□□□ -0.64
UBE3B-207ENST00000537063 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-207ENST00000537063 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-207ENST00000537063 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-207ENST00000537063 BRF1Q92994 677 aa11.02□□□□□ -0.64
UBE3B-207ENST00000537063 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.64
UBE3B-207ENST00000537063 PI16Q6UXB8 463 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 SMARCC1Q92922 1105 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 BTAF1O14981 1849 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 ZSCAN25Q6NSZ9 544 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 NSUN7Q8NE18 718 aaKnown RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 LPIN2Q92539 896 aa11.02□□□□□ -0.65
UBE3B-207ENST00000537063 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE3B-207ENST00000537063 ZMYM6O95789 1325 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 JAK2O60674 1132 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 CTDNEP1O95476 244 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 TSPY26PQ9H489 355 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 FIBPO43427 364 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 RESTQ13127 1097 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 STK3Q13188 491 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 CCDC102BQ68D86 513 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 MB21D2Q8IYB1 491 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-207ENST00000537063 PIH1D3Q9NQM4 214 aaKnown RBP11.01□□□□□ -0.65
UBE3B-207ENST00000537063 LY75O60449 1722 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 DTNBO60941 627 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 KRT85P78386 507 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 ACSBG1Q96GR2 724 aa11.01□□□□□ -0.65
UBE3B-207ENST00000537063 FUCA2Q9BTY2 467 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms