RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CD68P34810 354 aaPredicted RBP10.92□□□□□ -0.66
CCDC7-208ENST00000537047 PDE12Q6L8Q7 609 aaKnown RBP10.92□□□□□ -0.66
CCDC7-208ENST00000537047 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
CCDC7-208ENST00000537047 HHIPQ96QV1 700 aa10.92□□□□□ -0.66
CCDC7-208ENST00000537047 MUC3BQ9H195 1237 aa10.92□□□□□ -0.66
CCDC7-208ENST00000537047 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
CCDC7-208ENST00000537047 FSCN2O14926 492 aa10.91□□□□□ -0.66
CCDC7-208ENST00000537047 ADAM11O75078 769 aa10.91□□□□□ -0.66
CCDC7-208ENST00000537047 ACAD11Q709F0 780 aa10.91□□□□□ -0.66
CCDC7-208ENST00000537047 CACTIN-AS1Q8N1I8 211 aa10.91□□□□□ -0.66
CCDC7-208ENST00000537047 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-208ENST00000537047 PDGFAP04085 211 aa10.9□□□□□ -0.66
CCDC7-208ENST00000537047 EIF1AXP47813 144 aaKnown RBP10.9□□□□□ -0.66
CCDC7-208ENST00000537047 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CCDC7-208ENST00000537047 UBASH3BQ8TF42 649 aa10.9□□□□□ -0.66
CCDC7-208ENST00000537047 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
CCDC7-208ENST00000537047 NFKBIEO00221 500 aa10.89□□□□□ -0.67
CCDC7-208ENST00000537047 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
CCDC7-208ENST00000537047 DCAF11Q8TEB1 546 aa10.89□□□□□ -0.67
CCDC7-208ENST00000537047 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
CCDC7-208ENST00000537047 KLHDC7BQ96G42 594 aa10.89□□□□□ -0.67
CCDC7-208ENST00000537047 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
CCDC7-208ENST00000537047 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
CCDC7-208ENST00000537047 ARMC10Q8N2F6 343 aa10.88□□□□□ -0.67
CCDC7-208ENST00000537047 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
CCDC7-208ENST00000537047 CES1P23141 567 aa10.87□□□□□ -0.67
CCDC7-208ENST00000537047 SSFA2P28290 1259 aa10.87□□□□□ -0.67
CCDC7-208ENST00000537047 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
CCDC7-208ENST00000537047 ADAM19Q9H013 955 aa10.87□□□□□ -0.67
CCDC7-208ENST00000537047 PTPRAP18433 802 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 HGSNATQ68CP4 663 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 XKR5Q6UX68 686 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 KRTAP4-12Q9BQ66 201 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
CCDC7-208ENST00000537047 DUOXA2Q1HG44 320 aa10.85□□□□□ -0.67
CCDC7-208ENST00000537047 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
CCDC7-208ENST00000537047 MZF1P28698 734 aaPredicted RBP10.84□□□□□ -0.67
CCDC7-208ENST00000537047 SSTR4P31391 388 aa10.84□□□□□ -0.67
CCDC7-208ENST00000537047 PHLDB3Q6NSJ2 640 aa10.84□□□□□ -0.67
CCDC7-208ENST00000537047 SEC31BQ9NQW1 1179 aa10.84□□□□□ -0.67
CCDC7-208ENST00000537047 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CCDC7-208ENST00000537047 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
CCDC7-208ENST00000537047 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
CCDC7-208ENST00000537047 H3BRJ5 948 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 PDE2AO00408 941 aaPredicted RBP10.82□□□□□ -0.68
CCDC7-208ENST00000537047 EREGO14944 169 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 NLRP12P59046 1061 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 KRTAP1-3Q8IUG1 177 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 STOML1Q9UBI4 398 aa10.82□□□□□ -0.68
CCDC7-208ENST00000537047 MED26O95402 600 aa10.81□□□□□ -0.68
CCDC7-208ENST00000537047 CD97P48960 835 aa10.81□□□□□ -0.68
CCDC7-208ENST00000537047 FAM46AQ96IP4 442 aaKnown RBP10.81□□□□□ -0.68
CCDC7-208ENST00000537047 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
CCDC7-208ENST00000537047 FOXD3Q9UJU5 478 aaPredicted RBP10.81□□□□□ -0.68
CCDC7-208ENST00000537047 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
CCDC7-208ENST00000537047 RPLP1P05386 114 aaKnown RBP10.8□□□□□ -0.68
CCDC7-208ENST00000537047 PCSK2P16519 638 aa10.8□□□□□ -0.68
CCDC7-208ENST00000537047 UTP4Q969X6 686 aaKnown RBP10.8□□□□□ -0.68
CCDC7-208ENST00000537047 DHX15O43143 795 aaKnown RBP10.79□□□□□ -0.68
CCDC7-208ENST00000537047 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 TGFB1P01137 390 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 PIP4K2BP78356 416 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 AAMPQ13685 434 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 OSMRQ99650 979 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 ZKSCAN3Q9BRR0 538 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 CEP41Q9BYV8 373 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 SOX13Q9UN79 622 aa10.79□□□□□ -0.68
CCDC7-208ENST00000537047 HMX2A2RU54 273 aa10.78□□□□□ -0.68
CCDC7-208ENST00000537047 FAM177BA6PVY3 158 aa10.78□□□□□ -0.68
CCDC7-208ENST00000537047 TTC16Q8NEE8 873 aa10.78□□□□□ -0.68
CCDC7-208ENST00000537047 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
CCDC7-208ENST00000537047 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
CCDC7-208ENST00000537047 FZD6O60353 706 aa10.77□□□□□ -0.69
CCDC7-208ENST00000537047 NPR3P17342 541 aa10.77□□□□□ -0.69
CCDC7-208ENST00000537047 CABP4P57796 275 aa10.77□□□□□ -0.69
CCDC7-208ENST00000537047 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
CCDC7-208ENST00000537047 NXPE3Q969Y0 559 aa10.77□□□□□ -0.69
CCDC7-208ENST00000537047 CCDC87Q9NVE4 849 aa10.77□□□□□ -0.69
CCDC7-208ENST00000537047 GSC2O15499 205 aa10.76□□□□□ -0.69
CCDC7-208ENST00000537047 PREPP48147 710 aa10.76□□□□□ -0.69
CCDC7-208ENST00000537047 VN1R5Q7Z5H4 357 aa10.76□□□□□ -0.69
CCDC7-208ENST00000537047 TMEM102Q8N9M5 508 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-208ENST00000537047 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
CCDC7-208ENST00000537047 SOX1O00570 391 aaPredicted RBP10.75□□□□□ -0.69
CCDC7-208ENST00000537047 PHACTR2O75167 634 aa10.75□□□□□ -0.69
CCDC7-208ENST00000537047 ABL1P00519 1130 aa10.75□□□□□ -0.69
CCDC7-208ENST00000537047 UVSSAQ2YD98 709 aa10.75□□□□□ -0.69
CCDC7-208ENST00000537047 OSGEPQ9NPF4 335 aa10.75□□□□□ -0.69
CCDC7-208ENST00000537047 LCE3BQ5TA77 95 aa10.74□□□□□ -0.69
CCDC7-208ENST00000537047 PEAR1Q5VY43 1037 aaPredicted RBP10.74□□□□□ -0.69
CCDC7-208ENST00000537047 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
CCDC7-208ENST00000537047 ALKBH2Q6NS38 261 aa10.74□□□□□ -0.69
CCDC7-208ENST00000537047 ZDHHC13Q8IUH4 622 aa10.74□□□□□ -0.69
CCDC7-208ENST00000537047 WNT8BQ93098 351 aa10.74□□□□□ -0.69
CCDC7-208ENST00000537047 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-208ENST00000537047 POLR3DP05423 398 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms