RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
SYNE1-235ENST00000537033 ANKRD2Q9GZV1 360 aa17.73■□□□□ 0.43
SYNE1-235ENST00000537033 GBA2Q9HCG7 927 aaPredicted RBP17.73■□□□□ 0.43
SYNE1-235ENST00000537033 CA12O43570 354 aa17.72■□□□□ 0.43
SYNE1-235ENST00000537033 NOGQ13253 232 aa17.72■□□□□ 0.43
SYNE1-235ENST00000537033 LEMD3Q9Y2U8 911 aa17.72■□□□□ 0.43
SYNE1-235ENST00000537033 KCNJ4P48050 445 aa17.71■□□□□ 0.43
SYNE1-235ENST00000537033 BRPF1P55201 1214 aaPredicted RBP17.71■□□□□ 0.43
SYNE1-235ENST00000537033 FBXW7Q969H0 707 aa17.71■□□□□ 0.43
SYNE1-235ENST00000537033 COA1Q9GZY4 146 aa17.71■□□□□ 0.43
SYNE1-235ENST00000537033 MYOZ2Q9NPC6 264 aa17.71■□□□□ 0.43
SYNE1-235ENST00000537033 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.42
SYNE1-235ENST00000537033 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 CASP7P55210 303 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 SCARF1Q14162 830 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
SYNE1-235ENST00000537033 DLK2Q6UY11 383 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
SYNE1-235ENST00000537033 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
SYNE1-235ENST00000537033 CSF1RP07333 972 aa17.69■□□□□ 0.42
SYNE1-235ENST00000537033 GMLQ99445 158 aa17.69■□□□□ 0.42
SYNE1-235ENST00000537033 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
SYNE1-235ENST00000537033 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
SYNE1-235ENST00000537033 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 WTIPA6NIX2 430 aaPredicted RBP17.68■□□□□ 0.42
SYNE1-235ENST00000537033 F6X3S4 739 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
SYNE1-235ENST00000537033 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 RGMBQ6NW40 437 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 CCDC102AQ96A19 550 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 CDCA5Q96FF9 252 aa17.68■□□□□ 0.42
SYNE1-235ENST00000537033 ASTN2O75129 1339 aaPredicted RBP17.68■□□□□ 0.42
SYNE1-235ENST00000537033 CHRNDQ07001 517 aa17.67■□□□□ 0.42
SYNE1-235ENST00000537033 DACT2Q5SW24 774 aa17.67■□□□□ 0.42
SYNE1-235ENST00000537033 BEND3Q5T5X7 828 aa17.67■□□□□ 0.42
SYNE1-235ENST00000537033 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
SYNE1-235ENST00000537033 TSKSQ9UJT2 592 aa17.67■□□□□ 0.42
SYNE1-235ENST00000537033 PAPPA2Q9BXP8 1791 aa17.66■□□□□ 0.42
SYNE1-235ENST00000537033 MMP14P50281 582 aa17.66■□□□□ 0.42
SYNE1-235ENST00000537033 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
SYNE1-235ENST00000537033 GRM8O00222 908 aa17.65■□□□□ 0.42
SYNE1-235ENST00000537033 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
SYNE1-235ENST00000537033 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
SYNE1-235ENST00000537033 TXNRD3Q86VQ6 643 aa17.65■□□□□ 0.42
SYNE1-235ENST00000537033 C9orf78Q9NZ63 289 aaPredicted RBP17.65■□□□□ 0.42
SYNE1-235ENST00000537033 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
SYNE1-235ENST00000537033 FKBP1BP68106 108 aa17.64■□□□□ 0.41
SYNE1-235ENST00000537033 FOXO4P98177 505 aa17.64■□□□□ 0.41
SYNE1-235ENST00000537033 SLC4A10Q6U841 1118 aa17.64■□□□□ 0.41
SYNE1-235ENST00000537033 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
SYNE1-235ENST00000537033 AKAP11Q9UKA4 1901 aa17.64■□□□□ 0.41
SYNE1-235ENST00000537033 FAM155AB1AL88 458 aaPredicted RBP17.63■□□□□ 0.41
SYNE1-235ENST00000537033 ALDH1L1O75891 902 aa17.63■□□□□ 0.41
SYNE1-235ENST00000537033 KLRK1P26718 216 aa17.63■□□□□ 0.41
SYNE1-235ENST00000537033 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
SYNE1-235ENST00000537033 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
SYNE1-235ENST00000537033 ABHD8Q96I13 439 aa17.63■□□□□ 0.41
SYNE1-235ENST00000537033 NF2P35240 595 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 GTF2IP78347 998 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 NBPF9Q3BBW0 867 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 ZNF804AQ7Z570 1209 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 SRCIN1Q9C0H9 1055 aa17.62■□□□□ 0.41
SYNE1-235ENST00000537033 WNT10BO00744 389 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 TAF5LO75529 589 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 SLC10A3P09131 477 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 HELBQ8NG08 1087 aaPredicted RBP17.61■□□□□ 0.41
SYNE1-235ENST00000537033 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 CNNM1Q9NRU3 951 aa17.61■□□□□ 0.41
SYNE1-235ENST00000537033 CASP8AP2Q9UKL3 1982 aa17.6■□□□□ 0.41
SYNE1-235ENST00000537033 SASH1O94885 1247 aa17.6■□□□□ 0.41
SYNE1-235ENST00000537033 KIF23Q02241 960 aaPredicted RBP17.6■□□□□ 0.41
SYNE1-235ENST00000537033 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
SYNE1-235ENST00000537033 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
SYNE1-235ENST00000537033 C15orf52Q6ZUT6 534 aaKnown RBP17.6■□□□□ 0.41
SYNE1-235ENST00000537033 APOBEC3FQ8IUX4 373 aaKnown RBP17.6■□□□□ 0.41
SYNE1-235ENST00000537033 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
SYNE1-235ENST00000537033 ECM29Q5VYK3 1845 aa17.6■□□□□ 0.41
SYNE1-235ENST00000537033 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
SYNE1-235ENST00000537033 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
SYNE1-235ENST00000537033 SCAF8Q9UPN6 1271 aaKnown RBP17.59■□□□□ 0.41
SYNE1-235ENST00000537033 PLIN1O60240 522 aa17.58■□□□□ 0.4
SYNE1-235ENST00000537033 EPHA10Q5JZY3 1008 aa17.58■□□□□ 0.4
SYNE1-235ENST00000537033 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
SYNE1-235ENST00000537033 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.4
SYNE1-235ENST00000537033 COL1A1P02452 1464 aaPredicted RBP17.57■□□□□ 0.4
SYNE1-235ENST00000537033 E9PSI1 815 aa17.57■□□□□ 0.4
SYNE1-235ENST00000537033 SNAP23O00161 211 aa17.57■□□□□ 0.4
SYNE1-235ENST00000537033 DLGAP5Q15398 846 aa17.57■□□□□ 0.4
SYNE1-235ENST00000537033 PTPRCP08575 1304 aa17.56■□□□□ 0.4
SYNE1-235ENST00000537033 IRS2Q9Y4H2 1338 aa17.56■□□□□ 0.4
SYNE1-235ENST00000537033 MYO1BO43795 1136 aa17.56■□□□□ 0.4
SYNE1-235ENST00000537033 IL1R1P14778 569 aa17.56■□□□□ 0.4
SYNE1-235ENST00000537033 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
SYNE1-235ENST00000537033 CCDC85CA6NKD9 419 aa17.55■□□□□ 0.4
SYNE1-235ENST00000537033 TRPA1O75762 1119 aa17.55■□□□□ 0.4
SYNE1-235ENST00000537033 DGKZQ13574 1117 aa17.55■□□□□ 0.4
SYNE1-235ENST00000537033 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms