RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
CHFR-213ENST00000536843 EFCAB8A8MWE9 144 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
CHFR-213ENST00000536843 ICE2Q659A1 982 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 EXOC4Q96A65 974 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 AK7Q96M32 723 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
CHFR-213ENST00000536843 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
CHFR-213ENST00000536843 CAMTA1Q9Y6Y1 1673 aa18.16■□□□□ 0.5
CHFR-213ENST00000536843 SASH3O75995 380 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 SMC1AQ14683 1233 aaKnown RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 REXO1L1PQ8IX06 675 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 ANO10Q9NW15 660 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 USP42Q9H9J4 1324 aaKnown RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 SEC31AO94979 1220 aaKnown RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 GTF2A1P52655 376 aaPredicted RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
CHFR-213ENST00000536843 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
CHFR-213ENST00000536843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.5
CHFR-213ENST00000536843 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.5
CHFR-213ENST00000536843 MTX1Q13505 466 aa18.14■□□□□ 0.5
CHFR-213ENST00000536843 MNS1Q8NEH6 495 aa18.14■□□□□ 0.5
CHFR-213ENST00000536843 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.5
CHFR-213ENST00000536843 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.5
CHFR-213ENST00000536843 RGPD5Q99666 1765 aa18.14■□□□□ 0.49
CHFR-213ENST00000536843 CCP110O43303 1012 aa18.14■□□□□ 0.49
CHFR-213ENST00000536843 PDIA6Q15084 440 aa18.14■□□□□ 0.49
CHFR-213ENST00000536843 CC2D1AQ6P1N0 951 aaPredicted RBP18.14■□□□□ 0.49
CHFR-213ENST00000536843 ZCCHC17Q9NP64 241 aaKnown RBP18.14■□□□□ 0.49
CHFR-213ENST00000536843 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 ARMCX5Q6P1M9 558 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 GOLGA6L1Q8N7Z2 621 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 ALDH8A1Q9H2A2 487 aaPredicted RBP18.13■□□□□ 0.49
CHFR-213ENST00000536843 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHFR-213ENST00000536843 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
CHFR-213ENST00000536843 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 NRDCO43847 1150 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 RESTQ13127 1097 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 CABLES1Q8TDN4 633 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 ZBTB9Q96C00 473 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 DNAI1Q9UI46 699 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
CHFR-213ENST00000536843 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHFR-213ENST00000536843 LRRFIP1Q32MZ4 808 aaKnown RBP18.12■□□□□ 0.49
CHFR-213ENST00000536843 ZNF790Q6PG37 636 aa18.12■□□□□ 0.49
CHFR-213ENST00000536843 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
CHFR-213ENST00000536843 TATP17735 454 aaPredicted RBP18.12■□□□□ 0.49
CHFR-213ENST00000536843 PSMA5P28066 241 aa18.12■□□□□ 0.49
CHFR-213ENST00000536843 MMP14P50281 582 aa18.12■□□□□ 0.49
CHFR-213ENST00000536843 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
CHFR-213ENST00000536843 PHKG2P15735 406 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 ACTN2P35609 894 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 GYS2P54840 703 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 AOPEPQ8N6M6 819 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 LINS1Q8NG48 757 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 SUCLG2Q96I99 432 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 NAT10Q9H0A0 1025 aaKnown RBP18.11■□□□□ 0.49
CHFR-213ENST00000536843 GLRX3O76003 335 aaKnown RBP18.11■□□□□ 0.49
CHFR-213ENST00000536843 GORABQ5T7V8 394 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 HOMER1Q86YM7 354 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
CHFR-213ENST00000536843 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 ADAM21Q9UKJ8 722 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 ALS2Q96Q42 1657 aa18.11■□□□□ 0.49
CHFR-213ENST00000536843 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
CHFR-213ENST00000536843 DDX58O95786 925 aaKnown RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 CSB-PGBD3P0DP91 1061 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 TRIM65Q6PJ69 517 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 GPR161Q8N6U8 529 aaKnown RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 GRM8O00222 908 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 GUCY2CP25092 1073 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
CHFR-213ENST00000536843 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
CHFR-213ENST00000536843 IVLP07476 585 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 MYL6BP14649 208 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 EVCP57679 992 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 HDAC5Q9UQL6 1122 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 RBM8AQ9Y5S9 174 aaKnown RBP18.09■□□□□ 0.49
CHFR-213ENST00000536843 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
CHFR-213ENST00000536843 CCAR1Q8IX12 1150 aaKnown RBP18.09■□□□□ 0.49
CHFR-213ENST00000536843 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms