RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 FLT4P35916 1363 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-216ENST00000536548 HSPA4P34932 840 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 FXR1P51114 621 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPSF7-216ENST00000536548 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 KIAA1524Q8TCG1 905 aa9.24□□□□□ -0.93
CPSF7-216ENST00000536548 ZSCAN31Q96LW9 406 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-216ENST00000536548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.934e-9■■■□□ 15.2
CPSF7-216ENST00000536548 RANBP2P49792 3224 aaKnown RBP9.24□□□□□ -0.93
CPSF7-216ENST00000536548 NCAPD2Q15021 1401 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 HTTP42858 3142 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 UNC80Q8N2C7 3258 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 STX6O43752 255 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 RAB11FIP3O75154 756 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 GADD45BO75293 160 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-216ENST00000536548 F13A1P00488 732 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 ATP8B2P98198 1209 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 PRPF40BQ6NWY9 871 aaKnown RBP9.23□□□□□ -0.93
CPSF7-216ENST00000536548 SAPCD2Q86UD0 394 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 ANKRD7Q92527 254 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 RILPL2Q969X0 211 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 ZNF277Q9NRM2 450 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-216ENST00000536548 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 NARFQ9UHQ1 456 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 SMC3Q9UQE7 1217 aa9.23□□□□□ -0.93
CPSF7-216ENST00000536548 CTIFO43310 598 aaKnown RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 CABP4P57796 275 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 EYA1Q99502 592 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 TTC12Q9H892 705 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-216ENST00000536548 OGFRQ9NZT2 677 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 PALD1Q9ULE6 856 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 LIMCH1Q9UPQ0 1083 aa9.22□□□□□ -0.93
CPSF7-216ENST00000536548 SMTNL1A8MU46 457 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 CBX1P83916 185 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 NOL8Q76FK4 1167 aaKnown RBP9.21□□□□□ -0.94
CPSF7-216ENST00000536548 DNAJC10Q8IXB1 793 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 CHAMP1Q96JM3 812 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 ARID3AQ99856 593 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 FUCA2Q9BTY2 467 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 BRIP1Q9BX63 1249 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 CGNQ9P2M7 1197 aaKnown RBP9.21□□□□□ -0.94
CPSF7-216ENST00000536548 CNPY2Q9Y2B0 182 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 RAD50Q92878 1312 aa9.21□□□□□ -0.94
CPSF7-216ENST00000536548 ARFGEF2Q9Y6D5 1785 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
CPSF7-216ENST00000536548 CELF2O95319 508 aaKnown RBP9.2□□□□□ -0.94
CPSF7-216ENST00000536548 CAVIN2O95810 425 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 PDE6BP35913 854 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 EPS15P42566 896 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 FAM193AP78312 1265 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 PRR5LQ6MZQ0 368 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 SLC4A10Q6U841 1118 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 FAM200AQ8TCP9 573 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 ZNF830Q96NB3 372 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-216ENST00000536548 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 EXOC6BQ9Y2D4 811 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 PAXBP1Q9Y5B6 917 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 GJA3Q9Y6H8 435 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 CCDC171Q6TFL3 1326 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 VCANP13611 3396 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 COL15A1P39059 1388 aa9.2□□□□□ -0.94
CPSF7-216ENST00000536548 SCN11AQ9UI33 1791 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 DLG5Q8TDM6 1919 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 FZD9O00144 591 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 SGSM2O43147 1006 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 FIBPO43427 364 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
CPSF7-216ENST00000536548 PDCP20941 246 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 SYT1P21579 422 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 MAP3K11Q16584 847 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 HSP90AB4PQ58FF6 505 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 CCDC30Q5VVM6 783 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 TBC1D9BQ66K14 1250 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 SULT6B1Q6IMI4 303 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 CREBRFQ8IUR6 639 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 GPC2Q8N158 579 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 C7orf43Q8WVR3 580 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 CNKSR1Q969H4 720 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 TTC14Q96N46 770 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 CHMP4AQ9BY43 222 aa9.19□□□□□ -0.94
CPSF7-216ENST00000536548 UPF3BQ9BZI7 483 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms