RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PODNQ7Z5L7 613 aa17.96■□□□□ 0.47
UBE3B-206ENST00000536398 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
UBE3B-206ENST00000536398 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
UBE3B-206ENST00000536398 USP17L3A6NCW0 530 aa17.95■□□□□ 0.46
UBE3B-206ENST00000536398 USP17L4A6NCW7 530 aa17.95■□□□□ 0.46
UBE3B-206ENST00000536398 RPS12P25398 132 aaKnown RBP17.95■□□□□ 0.46
UBE3B-206ENST00000536398 USP17L1Q7RTZ2 530 aa17.95■□□□□ 0.46
UBE3B-206ENST00000536398 COA1Q9GZY4 146 aa17.95■□□□□ 0.46
UBE3B-206ENST00000536398 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
UBE3B-206ENST00000536398 LRRC24Q50LG9 513 aa17.94■□□□□ 0.46
UBE3B-206ENST00000536398 DLK2Q6UY11 383 aa17.94■□□□□ 0.46
UBE3B-206ENST00000536398 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
UBE3B-206ENST00000536398 GMLQ99445 158 aa17.94■□□□□ 0.46
UBE3B-206ENST00000536398 PGAP2Q9UHJ9 254 aa17.94■□□□□ 0.46
UBE3B-206ENST00000536398 DACT2Q5SW24 774 aa17.93■□□□□ 0.46
UBE3B-206ENST00000536398 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
UBE3B-206ENST00000536398 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-206ENST00000536398 GLIS2Q9BZE0 524 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-206ENST00000536398 RIPOR2Q9Y4F9 1068 aa17.93■□□□□ 0.46
UBE3B-206ENST00000536398 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
UBE3B-206ENST00000536398 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 TRIM27P14373 513 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 AGBL3Q8NEM8 1001 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 MEIS3Q99687 375 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 CD209Q9NNX6 404 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
UBE3B-206ENST00000536398 PCNTO95613 3336 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 ASTN2O75129 1339 aaPredicted RBP17.92■□□□□ 0.46
UBE3B-206ENST00000536398 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
UBE3B-206ENST00000536398 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
UBE3B-206ENST00000536398 RFX5P48382 616 aaPredicted RBP17.91■□□□□ 0.46
UBE3B-206ENST00000536398 ZNF280AP59817 542 aaPredicted RBP17.91■□□□□ 0.46
UBE3B-206ENST00000536398 CST9Q5W186 159 aa17.91■□□□□ 0.46
UBE3B-206ENST00000536398 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
UBE3B-206ENST00000536398 ZC3H15Q8WU90 426 aaKnown RBP17.91■□□□□ 0.46
UBE3B-206ENST00000536398 GTF2IP78347 998 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 KIF4BQ2VIQ3 1234 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 STRIP1Q5VSL9 837 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 TTLL5Q6EMB2 1281 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 ATF7IPQ6VMQ6 1270 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 C15orf52Q6ZUT6 534 aaKnown RBP17.9■□□□□ 0.46
UBE3B-206ENST00000536398 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
UBE3B-206ENST00000536398 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
UBE3B-206ENST00000536398 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
UBE3B-206ENST00000536398 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
UBE3B-206ENST00000536398 JMYQ8N9B5 988 aa17.89■□□□□ 0.45
UBE3B-206ENST00000536398 JAG2Q9Y219 1238 aa17.89■□□□□ 0.45
UBE3B-206ENST00000536398 A0A1B0GUL6 1792 aa17.89■□□□□ 0.45
UBE3B-206ENST00000536398 GYG1P46976 350 aa17.88■□□□□ 0.45
UBE3B-206ENST00000536398 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
UBE3B-206ENST00000536398 METTL24Q5JXM2 366 aa17.88■□□□□ 0.45
UBE3B-206ENST00000536398 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
UBE3B-206ENST00000536398 ZNF609O15014 1411 aa17.88■□□□□ 0.45
UBE3B-206ENST00000536398 IL1R1P14778 569 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 UBE4AQ14139 1066 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 SCARF1Q14162 830 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 CDC37L1Q7L3B6 337 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 VGLL2Q8N8G2 317 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 FAM84BQ96KN1 310 aaPredicted RBP17.87■□□□□ 0.45
UBE3B-206ENST00000536398 MYOZ2Q9NPC6 264 aa17.87■□□□□ 0.45
UBE3B-206ENST00000536398 PSME4Q14997 1843 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 ADM5C9JUS6 153 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 CELF2O95319 508 aaKnown RBP17.86■□□□□ 0.45
UBE3B-206ENST00000536398 ZNF804AQ7Z570 1209 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 ABT1Q9ULW3 272 aaKnown RBP17.86■□□□□ 0.45
UBE3B-206ENST00000536398 SCAF8Q9UPN6 1271 aaKnown RBP17.86■□□□□ 0.45
UBE3B-206ENST00000536398 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
UBE3B-206ENST00000536398 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
UBE3B-206ENST00000536398 EYA2O00167 538 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 VEGFBP49765 207 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 ATG9AQ7Z3C6 839 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 KRT26Q7Z3Y9 468 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 SIL1Q9H173 461 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 ZNF408Q9H9D4 720 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 GGA3Q9NZ52 723 aa17.85■□□□□ 0.45
UBE3B-206ENST00000536398 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
UBE3B-206ENST00000536398 PDE8BO95263 885 aa17.84■□□□□ 0.45
UBE3B-206ENST00000536398 HIBADHP31937 336 aaKnown RBP17.84■□□□□ 0.45
UBE3B-206ENST00000536398 NBPF9Q3BBW0 867 aa17.84■□□□□ 0.45
UBE3B-206ENST00000536398 ANGEL2Q5VTE6 544 aaKnown RBP17.84■□□□□ 0.45
UBE3B-206ENST00000536398 DCPSQ96C86 337 aaKnown RBP17.84■□□□□ 0.45
UBE3B-206ENST00000536398 MYO3BQ8WXR4 1341 aa17.83■□□□□ 0.44
UBE3B-206ENST00000536398 RASSF10A6NK89 507 aa17.83■□□□□ 0.44
UBE3B-206ENST00000536398 F8W031 263 aaPredicted RBP17.83■□□□□ 0.44
UBE3B-206ENST00000536398 SASH1O94885 1247 aa17.83■□□□□ 0.44
UBE3B-206ENST00000536398 DEFB115Q30KQ5 88 aa17.83■□□□□ 0.44
UBE3B-206ENST00000536398 TDRD7Q8NHU6 1098 aaKnown RBP17.83■□□□□ 0.44
UBE3B-206ENST00000536398 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.44
UBE3B-206ENST00000536398 GNAI3P08754 354 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 RLBP1P12271 317 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 FGFR2P21802 821 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 FBXO33Q7Z6M2 555 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 OGFOD1Q8N543 542 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
UBE3B-206ENST00000536398 POLR2AP24928 1970 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms