RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
RTN3-207ENST00000536011 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
RTN3-207ENST00000536011 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
RTN3-207ENST00000536011 SULF1Q8IWU6 871 aa16.69■□□□□ 0.26
RTN3-207ENST00000536011 CA12O43570 354 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 USP17L8P0C7I0 530 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 LBX1P52954 281 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 ZNF280AP59817 542 aaPredicted RBP16.68■□□□□ 0.26
RTN3-207ENST00000536011 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 MYO3BQ8WXR4 1341 aa16.68■□□□□ 0.26
RTN3-207ENST00000536011 CAPN15O75808 1086 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 EGFRP00533 1210 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 CSF1RP07333 972 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 KCNJ4P48050 445 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 MMP14P50281 582 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 CASP7P55210 303 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 C2orf69Q8N8R5 385 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
RTN3-207ENST00000536011 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
RTN3-207ENST00000536011 HSPA8P11142 646 aaKnown RBP16.66■□□□□ 0.26
RTN3-207ENST00000536011 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
RTN3-207ENST00000536011 HUNKP57058 714 aa16.66■□□□□ 0.26
RTN3-207ENST00000536011 NOGQ13253 232 aa16.66■□□□□ 0.26
RTN3-207ENST00000536011 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
RTN3-207ENST00000536011 ZNF804BA4D1E1 1349 aa16.66■□□□□ 0.26
RTN3-207ENST00000536011 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
RTN3-207ENST00000536011 STRIP1Q5VSL9 837 aa16.65■□□□□ 0.26
RTN3-207ENST00000536011 GMLQ99445 158 aa16.65■□□□□ 0.26
RTN3-207ENST00000536011 GBA2Q9HCG7 927 aaPredicted RBP16.65■□□□□ 0.26
RTN3-207ENST00000536011 MYOZ2Q9NPC6 264 aa16.65■□□□□ 0.26
RTN3-207ENST00000536011 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
RTN3-207ENST00000536011 ADM5C9JUS6 153 aa16.64■□□□□ 0.25
RTN3-207ENST00000536011 AOC2O75106 756 aa16.64■□□□□ 0.25
RTN3-207ENST00000536011 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
RTN3-207ENST00000536011 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
RTN3-207ENST00000536011 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.25
RTN3-207ENST00000536011 F6X3S4 739 aa16.63■□□□□ 0.25
RTN3-207ENST00000536011 GRM8O00222 908 aa16.63■□□□□ 0.25
RTN3-207ENST00000536011 SCARF1Q14162 830 aa16.63■□□□□ 0.25
RTN3-207ENST00000536011 ANGEL2Q5VTE6 544 aaKnown RBP16.63■□□□□ 0.25
RTN3-207ENST00000536011 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
RTN3-207ENST00000536011 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
RTN3-207ENST00000536011 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
RTN3-207ENST00000536011 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 CHRNDQ07001 517 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 RGMBQ6NW40 437 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 CDCA5Q96FF9 252 aa16.62■□□□□ 0.25
RTN3-207ENST00000536011 FKBP1BP68106 108 aa16.61■□□□□ 0.25
RTN3-207ENST00000536011 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
RTN3-207ENST00000536011 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
RTN3-207ENST00000536011 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
RTN3-207ENST00000536011 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
RTN3-207ENST00000536011 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
RTN3-207ENST00000536011 ZNF157P51786 506 aaPredicted RBP16.6■□□□□ 0.25
RTN3-207ENST00000536011 FOXO4P98177 505 aa16.6■□□□□ 0.25
RTN3-207ENST00000536011 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
RTN3-207ENST00000536011 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
RTN3-207ENST00000536011 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
RTN3-207ENST00000536011 E9PSI1 815 aa16.59■□□□□ 0.25
RTN3-207ENST00000536011 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
RTN3-207ENST00000536011 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
RTN3-207ENST00000536011 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
RTN3-207ENST00000536011 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
RTN3-207ENST00000536011 LDHAL6AQ6ZMR3 332 aa16.58■□□□□ 0.24
RTN3-207ENST00000536011 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.24
RTN3-207ENST00000536011 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
RTN3-207ENST00000536011 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
RTN3-207ENST00000536011 PTPRCP08575 1304 aa16.57■□□□□ 0.24
RTN3-207ENST00000536011 KLRK1P26718 216 aa16.57■□□□□ 0.24
RTN3-207ENST00000536011 NF2P35240 595 aa16.57■□□□□ 0.24
RTN3-207ENST00000536011 GTF2IP78347 998 aa16.57■□□□□ 0.24
RTN3-207ENST00000536011 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
RTN3-207ENST00000536011 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
RTN3-207ENST00000536011 ZNF646O15015 1829 aaPredicted RBP16.56■□□□□ 0.24
RTN3-207ENST00000536011 WNT10BO00744 389 aa16.56■□□□□ 0.24
RTN3-207ENST00000536011 KIAA0825Q8IV33 1275 aa16.56■□□□□ 0.24
RTN3-207ENST00000536011 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
RTN3-207ENST00000536011 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
RTN3-207ENST00000536011 SAGE1Q9NXZ1 904 aa16.56■□□□□ 0.24
RTN3-207ENST00000536011 FAM155AB1AL88 458 aaPredicted RBP16.55■□□□□ 0.24
RTN3-207ENST00000536011 TAF5LO75529 589 aa16.55■□□□□ 0.24
RTN3-207ENST00000536011 SLC10A3P09131 477 aa16.55■□□□□ 0.24
RTN3-207ENST00000536011 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
RTN3-207ENST00000536011 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
RTN3-207ENST00000536011 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
RTN3-207ENST00000536011 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
RTN3-207ENST00000536011 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
RTN3-207ENST00000536011 SASH1O94885 1247 aa16.54■□□□□ 0.24
RTN3-207ENST00000536011 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
RTN3-207ENST00000536011 UTYO14607 1347 aa16.53■□□□□ 0.24
RTN3-207ENST00000536011 IRS2Q9Y4H2 1338 aa16.53■□□□□ 0.24
RTN3-207ENST00000536011 IL1R1P14778 569 aa16.53■□□□□ 0.24
RTN3-207ENST00000536011 FKBP1AP62942 108 aaKnown RBP16.53■□□□□ 0.24
RTN3-207ENST00000536011 KIF23Q02241 960 aaPredicted RBP16.53■□□□□ 0.24
RTN3-207ENST00000536011 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
RTN3-207ENST00000536011 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms