RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
VPS37C-203ENST00000536000 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
VPS37C-203ENST00000536000 KLHDC4Q8TBB5 520 aa15.93■□□□□ 0.14
VPS37C-203ENST00000536000 MROH5Q6ZUA9 1318 aa15.93■□□□□ 0.14
VPS37C-203ENST00000536000 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
VPS37C-203ENST00000536000 LRRC24Q50LG9 513 aa15.92■□□□□ 0.14
VPS37C-203ENST00000536000 METTL24Q5JXM2 366 aa15.92■□□□□ 0.14
VPS37C-203ENST00000536000 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
VPS37C-203ENST00000536000 KLRK1P26718 216 aa15.91■□□□□ 0.14
VPS37C-203ENST00000536000 RFX5P48382 616 aaPredicted RBP15.91■□□□□ 0.14
VPS37C-203ENST00000536000 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
VPS37C-203ENST00000536000 MICALL2Q8IY33 904 aa15.91■□□□□ 0.14
VPS37C-203ENST00000536000 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
VPS37C-203ENST00000536000 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
VPS37C-203ENST00000536000 CD209Q9NNX6 404 aa15.91■□□□□ 0.14
VPS37C-203ENST00000536000 EYA2O00167 538 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 GNAI2P04899 355 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 MS4A1P11836 297 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 PTPN12Q05209 780 aaKnown RBP15.9■□□□□ 0.14
VPS37C-203ENST00000536000 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
VPS37C-203ENST00000536000 TTLL5Q6EMB2 1281 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 ZNF804AQ7Z570 1209 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
VPS37C-203ENST00000536000 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
VPS37C-203ENST00000536000 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
VPS37C-203ENST00000536000 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
VPS37C-203ENST00000536000 SAMD7Q7Z3H4 446 aa15.89■□□□□ 0.13
VPS37C-203ENST00000536000 FBXO3Q9UK99 471 aa15.89■□□□□ 0.13
VPS37C-203ENST00000536000 PDE8BO95263 885 aa15.88■□□□□ 0.13
VPS37C-203ENST00000536000 ITGBL1O95965 494 aaPredicted RBP15.88■□□□□ 0.13
VPS37C-203ENST00000536000 GTF2IP78347 998 aa15.88■□□□□ 0.13
VPS37C-203ENST00000536000 ITPRIPQ8IWB1 547 aa15.88■□□□□ 0.13
VPS37C-203ENST00000536000 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 SRGAP3O43295 1099 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 RLBP1P12271 317 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 HIBADHP31937 336 aaKnown RBP15.87■□□□□ 0.13
VPS37C-203ENST00000536000 HIRAP54198 1017 aaPredicted RBP15.87■□□□□ 0.13
VPS37C-203ENST00000536000 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
VPS37C-203ENST00000536000 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 ZC3H15Q8WU90 426 aaKnown RBP15.87■□□□□ 0.13
VPS37C-203ENST00000536000 GMLQ99445 158 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 SIL1Q9H173 461 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 CEP126Q9P2H0 1117 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 IRS2Q9Y4H2 1338 aa15.87■□□□□ 0.13
VPS37C-203ENST00000536000 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
VPS37C-203ENST00000536000 CIAO1O76071 339 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 IFIT1P09914 478 aaKnown RBP15.86■□□□□ 0.13
VPS37C-203ENST00000536000 IL1R1P14778 569 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 GYG1P46976 350 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 CAVIN4Q5BKX8 364 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 ATG9AQ7Z3C6 839 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 PANK1Q8TE04 598 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 FAM84BQ96KN1 310 aaPredicted RBP15.86■□□□□ 0.13
VPS37C-203ENST00000536000 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 COPRSQ9NQ92 184 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 PGAP2Q9UHJ9 254 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
VPS37C-203ENST00000536000 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
VPS37C-203ENST00000536000 IL15P40933 162 aaPredicted RBP15.85■□□□□ 0.13
VPS37C-203ENST00000536000 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
VPS37C-203ENST00000536000 HTRA3P83110 453 aa15.85■□□□□ 0.13
VPS37C-203ENST00000536000 MTX1Q13505 466 aa15.85■□□□□ 0.13
VPS37C-203ENST00000536000 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
VPS37C-203ENST00000536000 VGLL2Q8N8G2 317 aa15.85■□□□□ 0.13
VPS37C-203ENST00000536000 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
VPS37C-203ENST00000536000 PASKQ96RG2 1323 aa15.85■□□□□ 0.13
VPS37C-203ENST00000536000 SASH1O94885 1247 aa15.84■□□□□ 0.13
VPS37C-203ENST00000536000 MMP14P50281 582 aa15.84■□□□□ 0.13
VPS37C-203ENST00000536000 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
VPS37C-203ENST00000536000 KIF4BQ2VIQ3 1234 aa15.84■□□□□ 0.13
VPS37C-203ENST00000536000 FBXO33Q7Z6M2 555 aa15.84■□□□□ 0.13
VPS37C-203ENST00000536000 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
VPS37C-203ENST00000536000 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
VPS37C-203ENST00000536000 HDAC9Q9UKV0 1011 aa15.84■□□□□ 0.13
VPS37C-203ENST00000536000 FRAT2O75474 233 aaPredicted RBP15.83■□□□□ 0.12
VPS37C-203ENST00000536000 EGFRP00533 1210 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 SLC5A1P13866 664 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 ATP8B2P98198 1209 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 CDC37L1Q7L3B6 337 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 LPIN2Q92539 896 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 DCPSQ96C86 337 aaKnown RBP15.83■□□□□ 0.12
VPS37C-203ENST00000536000 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
VPS37C-203ENST00000536000 TMEM88BA6NKF7 163 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 FGFR2P21802 821 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 BCAMP50895 628 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
VPS37C-203ENST00000536000 SCARF1Q14162 830 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 KIAA0825Q8IV33 1275 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 DNAJC5GQ8N7S2 189 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 CREBZFQ9NS37 354 aa15.82■□□□□ 0.12
VPS37C-203ENST00000536000 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 ZNF609O15014 1411 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
VPS37C-203ENST00000536000 USP48Q86UV5 1035 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 ADAMTSL1Q8N6G6 1762 aa15.81■□□□□ 0.12
VPS37C-203ENST00000536000 GLIS2Q9BZE0 524 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms