RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZNF397Q8NF99 534 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-214ENST00000535493 ALDH8A1Q9H2A2 487 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-214ENST00000535493 ANO10Q9NW15 660 aa15.66■□□□□ 0.1
HDAC4-214ENST00000535493 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 ATP5JP18859 108 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-214ENST00000535493 NEXNQ0ZGT2 675 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-214ENST00000535493 HSP90AB3PQ58FF7 597 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 ARMCX5Q6P1M9 558 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 KRT222Q8N1A0 295 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 TMX1Q9H3N1 280 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 PFKFB2O60825 505 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 SYCP1Q15431 976 aa15.65■□□□□ 0.1
HDAC4-214ENST00000535493 DHX32Q7L7V1 743 aaKnown RBP15.65■□□□□ 0.1
HDAC4-214ENST00000535493 FAM177A1Q8N128 213 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-214ENST00000535493 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
HDAC4-214ENST00000535493 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
HDAC4-214ENST00000535493 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
HDAC4-214ENST00000535493 TBX22Q9Y458 520 aa15.64■□□□□ 0.09
HDAC4-214ENST00000535493 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
HDAC4-214ENST00000535493 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
HDAC4-214ENST00000535493 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
HDAC4-214ENST00000535493 FDPSP14324 419 aaKnown RBP15.63■□□□□ 0.09
HDAC4-214ENST00000535493 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 N4BP2Q86UW6 1770 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-214ENST00000535493 E7EWF7 191 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 PDIA3P30101 505 aaKnown RBP15.63■□□□□ 0.09
HDAC4-214ENST00000535493 HOMER1Q86YM7 354 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 FMR1NBQ8N0W7 255 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-214ENST00000535493 ANKRD24Q8TF21 1146 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 PPP1R13BQ96KQ4 1090 aa15.63■□□□□ 0.09
HDAC4-214ENST00000535493 A0A087WZG4 1122 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 MARCKSP29966 332 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-214ENST00000535493 RFX5P48382 616 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-214ENST00000535493 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
HDAC4-214ENST00000535493 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 UTYO14607 1347 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 CTAGE5O15320 804 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 ANKRD13DQ6ZTN6 518 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 MRPS27Q92552 414 aaKnown RBP15.62■□□□□ 0.09
HDAC4-214ENST00000535493 ZNF496Q96IT1 587 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-214ENST00000535493 ADGRL3Q9HAR2 1447 aa15.62■□□□□ 0.09
HDAC4-214ENST00000535493 CAVIN2O95810 425 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 STK38Q15208 465 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-214ENST00000535493 CHMP4AQ9BY43 222 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 GCP02774 474 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
HDAC4-214ENST00000535493 GABPB1Q06547 395 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-214ENST00000535493 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-214ENST00000535493 KIAA1468Q9P260 1216 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 JCADQ9P266 1359 aa15.61■□□□□ 0.09
HDAC4-214ENST00000535493 RGPD2P0DJD1 1756 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 NEMFO60524 1076 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 SFPQP23246 707 aaKnown RBP eCLIP15.6■□□□□ 0.094e-6■■■■□ 23.6
HDAC4-214ENST00000535493 ZNF396Q96N95 335 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-214ENST00000535493 HAUS7Q99871 368 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
HDAC4-214ENST00000535493 ARHGAP29Q52LW3 1261 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 STK11IPQ8N1F8 1099 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 DPF2Q92785 391 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 AIFM3Q96NN9 605 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-214ENST00000535493 COPRSQ9NQ92 184 aa15.6■□□□□ 0.09
HDAC4-214ENST00000535493 FANCGO15287 622 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 EXOSC10Q01780 885 aaKnown RBP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 KBTBD3Q8NAB2 608 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 CCDC85AQ96PX6 553 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 RXRAP19793 462 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 CLCN6P51797 869 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 FKBP4Q02790 459 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 ORAI2Q96SN7 254 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 NAT10Q9H0A0 1025 aaKnown RBP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 PAG1Q9NWQ8 432 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 DENND2AQ9ULE3 1009 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 KIF28PB7ZC32 967 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 POLR3GO15318 223 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 SEC31AO94979 1220 aaKnown RBP15.59■□□□□ 0.09
HDAC4-214ENST00000535493 LINC00301Q8NCQ3 95 aa15.59■□□□□ 0.09
HDAC4-214ENST00000535493 ZNF202O95125 648 aa15.58■□□□□ 0.08
HDAC4-214ENST00000535493 LLPHQ9BRT6 129 aaKnown RBP15.58■□□□□ 0.08
HDAC4-214ENST00000535493 M0R2C6 588 aa15.58■□□□□ 0.08
HDAC4-214ENST00000535493 SLC3A2P08195 630 aaKnown RBP15.58■□□□□ 0.08
HDAC4-214ENST00000535493 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
HDAC4-214ENST00000535493 ADALQ6DHV7 355 aa15.58■□□□□ 0.08
HDAC4-214ENST00000535493 NEDD4P46934 1319 aa15.57■□□□□ 0.08
HDAC4-214ENST00000535493 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
HDAC4-214ENST00000535493 VGLL3A8MV65 326 aa15.57■□□□□ 0.08
HDAC4-214ENST00000535493 UTP14AQ9BVJ6 771 aaKnown RBP15.57■□□□□ 0.08
HDAC4-214ENST00000535493 HEG1Q9ULI3 1381 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms