RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 OSMRQ99650 979 aa9.42□□□□□ -0.9
PRKDC-205ENST00000535375 RBCK1Q9BYM8 510 aa9.42□□□□□ -0.9
PRKDC-205ENST00000535375 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
PRKDC-205ENST00000535375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
PRKDC-205ENST00000535375 PDE2AO00408 941 aaPredicted RBP9.41□□□□□ -0.9
PRKDC-205ENST00000535375 BAG6P46379 1132 aa9.41□□□□□ -0.9
PRKDC-205ENST00000535375 CD163Q86VB7 1156 aa9.41□□□□□ -0.9
PRKDC-205ENST00000535375 DCAF11Q8TEB1 546 aa9.41□□□□□ -0.9
PRKDC-205ENST00000535375 POP1Q99575 1024 aaKnown RBP9.41□□□□□ -0.9
PRKDC-205ENST00000535375 NIF3L1Q9GZT8 377 aa9.41□□□□□ -0.9
PRKDC-205ENST00000535375 DZANK1Q9NVP4 752 aa9.41□□□□□ -0.9
PRKDC-205ENST00000535375 C9orf172C9J069 976 aa9.4□□□□□ -0.9
PRKDC-205ENST00000535375 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
PRKDC-205ENST00000535375 CHRNA4P43681 627 aa9.4□□□□□ -0.9
PRKDC-205ENST00000535375 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
PRKDC-205ENST00000535375 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
PRKDC-205ENST00000535375 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
PRKDC-205ENST00000535375 CPNE3O75131 537 aaKnown RBP9.39□□□□□ -0.91
PRKDC-205ENST00000535375 ACPPP15309 386 aa9.39□□□□□ -0.91
PRKDC-205ENST00000535375 CDC25BP30305 580 aa9.39□□□□□ -0.91
PRKDC-205ENST00000535375 CABP4P57796 275 aa9.39□□□□□ -0.91
PRKDC-205ENST00000535375 NRG1Q02297 640 aaPredicted RBP9.39□□□□□ -0.91
PRKDC-205ENST00000535375 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
PRKDC-205ENST00000535375 SRA1Q9HD15 236 aaKnown RBP9.39□□□□□ -0.91
PRKDC-205ENST00000535375 USP21Q9UK80 565 aa9.39□□□□□ -0.91
PRKDC-205ENST00000535375 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
PRKDC-205ENST00000535375 TRPA1O75762 1119 aa9.38□□□□□ -0.91
PRKDC-205ENST00000535375 ORC1Q13415 861 aa9.38□□□□□ -0.91
PRKDC-205ENST00000535375 TMEM102Q8N9M5 508 aaPredicted RBP9.38□□□□□ -0.91
PRKDC-205ENST00000535375 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
PRKDC-205ENST00000535375 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
PRKDC-205ENST00000535375 GPR182O15218 404 aa9.37□□□□□ -0.91
PRKDC-205ENST00000535375 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
PRKDC-205ENST00000535375 ZSCAN29Q8IWY8 852 aaPredicted RBP9.37□□□□□ -0.91
PRKDC-205ENST00000535375 GALNT12Q8IXK2 581 aa9.37□□□□□ -0.91
PRKDC-205ENST00000535375 ADAM19Q9H013 955 aa9.37□□□□□ -0.91
PRKDC-205ENST00000535375 DNAJC25Q9H1X3 360 aa9.37□□□□□ -0.91
PRKDC-205ENST00000535375 NFKBIEO00221 500 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
PRKDC-205ENST00000535375 GATA4P43694 442 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 TXNDC11Q6PKC3 985 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 IGF2-ASQ6U949 168 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 ASAP3Q8TDY4 903 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 NXPE3Q969Y0 559 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 LENG1Q96BZ8 264 aaPredicted RBP9.36□□□□□ -0.91
PRKDC-205ENST00000535375 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
PRKDC-205ENST00000535375 EIF1AYO14602 144 aaKnown RBP9.35□□□□□ -0.91
PRKDC-205ENST00000535375 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
PRKDC-205ENST00000535375 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
PRKDC-205ENST00000535375 USPL1Q5W0Q7 1092 aa9.35□□□□□ -0.91
PRKDC-205ENST00000535375 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
PRKDC-205ENST00000535375 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
PRKDC-205ENST00000535375 HHIPQ96QV1 700 aa9.35□□□□□ -0.91
PRKDC-205ENST00000535375 SELPP16109 830 aa9.34□□□□□ -0.91
PRKDC-205ENST00000535375 EPHA1P21709 976 aa9.34□□□□□ -0.91
PRKDC-205ENST00000535375 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
PRKDC-205ENST00000535375 BSNDQ8WZ55 320 aa9.34□□□□□ -0.91
PRKDC-205ENST00000535375 CSRNP1Q96S65 589 aa9.34□□□□□ -0.91
PRKDC-205ENST00000535375 DLL1O00548 723 aa9.33□□□□□ -0.92
PRKDC-205ENST00000535375 ADAM23O75077 832 aa9.33□□□□□ -0.92
PRKDC-205ENST00000535375 CCDC74AQ96AQ1 378 aa9.33□□□□□ -0.92
PRKDC-205ENST00000535375 LIN7BQ9HAP6 207 aa9.33□□□□□ -0.92
PRKDC-205ENST00000535375 A0A1W2PP55 124 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 H3BRJ5 948 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 FSCN2O14926 492 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
PRKDC-205ENST00000535375 IGHA2P01877 340 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 ARL4DP49703 201 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 ADAMTSL4Q6UY14 1074 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 EHD4Q9H223 541 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
PRKDC-205ENST00000535375 K7ELQ4 463 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-205ENST00000535375 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-205ENST00000535375 SLC7A3Q8WY07 619 aa9.31□□□□□ -0.92
PRKDC-205ENST00000535375 WNT8BQ93098 351 aa9.31□□□□□ -0.92
PRKDC-205ENST00000535375 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
PRKDC-205ENST00000535375 BHLHE41Q9C0J9 482 aaPredicted RBP9.31□□□□□ -0.92
PRKDC-205ENST00000535375 MRPL18Q9H0U6 180 aaKnown RBP9.31□□□□□ -0.92
PRKDC-205ENST00000535375 NPHS2Q9NP85 383 aa9.31□□□□□ -0.92
PRKDC-205ENST00000535375 TREHO43280 583 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 FURINP09958 794 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 IKBKEQ14164 716 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 ADGRE1Q14246 886 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 MBTPS1Q14703 1052 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 KIAA0319Q5VV43 1072 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 SND1Q7KZF4 910 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRKDC-205ENST00000535375 GALNT11Q8NCW6 608 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 SOX13Q9UN79 622 aa9.3□□□□□ -0.92
PRKDC-205ENST00000535375 LOC100996750A0A140TA64 210 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 DSC3Q14574 896 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 TXNRD3Q86VQ6 643 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 CCNJLQ8IV13 435 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 ASB16Q96NS5 453 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 KRTAP4-6Q9BYQ5 205 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 OSGEPQ9NPF4 335 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 PPP4R2Q9NY27 417 aa9.29□□□□□ -0.92
PRKDC-205ENST00000535375 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms