RNA–Protein interactions for RNA: ENST00000534829.5

SSPN-203, Transcript of sarcospan, humanhuman

TSL 3

Gene SSPN, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-203ENST00000534829 EYA3Q99504 573 aa12.89□□□□□ -0.35
SSPN-203ENST00000534829 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
SSPN-203ENST00000534829 WNT10BO00744 389 aa12.88□□□□□ -0.35
SSPN-203ENST00000534829 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
SSPN-203ENST00000534829 GJB1P08034 283 aa12.88□□□□□ -0.35
SSPN-203ENST00000534829 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
SSPN-203ENST00000534829 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
SSPN-203ENST00000534829 PANK3Q9H999 370 aa12.87□□□□□ -0.35
SSPN-203ENST00000534829 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
SSPN-203ENST00000534829 MYL6BP14649 208 aa12.86□□□□□ -0.35
SSPN-203ENST00000534829 ZC3H12CQ9C0D7 883 aaKnown RBP12.86□□□□□ -0.35
SSPN-203ENST00000534829 PIEZO1Q92508 2521 aa12.86□□□□□ -0.35
SSPN-203ENST00000534829 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
SSPN-203ENST00000534829 CCL5P13501 91 aa12.85□□□□□ -0.35
SSPN-203ENST00000534829 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
SSPN-203ENST00000534829 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
SSPN-203ENST00000534829 SASH1O94885 1247 aa12.84□□□□□ -0.35
SSPN-203ENST00000534829 MCM10Q7L590 875 aa12.84□□□□□ -0.35
SSPN-203ENST00000534829 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
SSPN-203ENST00000534829 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
SSPN-203ENST00000534829 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
SSPN-203ENST00000534829 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
SSPN-203ENST00000534829 CDH23Q9H251 3354 aa12.83□□□□□ -0.36
SSPN-203ENST00000534829 LACTBP83111 547 aaPredicted RBP12.83□□□□□ -0.36
SSPN-203ENST00000534829 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
SSPN-203ENST00000534829 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.36
SSPN-203ENST00000534829 U2AF1L4Q8WU68 220 aaKnown RBP12.83□□□□□ -0.36
SSPN-203ENST00000534829 RNF208Q9H0X6 261 aa12.83□□□□□ -0.36
SSPN-203ENST00000534829 COL1A1P02452 1464 aaPredicted RBP12.83□□□□□ -0.36
SSPN-203ENST00000534829 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
SSPN-203ENST00000534829 NCOR1O75376 2440 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 G3V3G9 751 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 PRMT2P55345 433 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 NLRP10Q86W26 655 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 ZFYVE28Q9HCC9 887 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
SSPN-203ENST00000534829 UFL1O94874 794 aa12.81□□□□□ -0.36
SSPN-203ENST00000534829 GNRH1P01148 92 aa12.81□□□□□ -0.36
SSPN-203ENST00000534829 CTGFP29279 349 aa12.81□□□□□ -0.36
SSPN-203ENST00000534829 GRK4P32298 578 aa12.81□□□□□ -0.36
SSPN-203ENST00000534829 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
SSPN-203ENST00000534829 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
SSPN-203ENST00000534829 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
SSPN-203ENST00000534829 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
SSPN-203ENST00000534829 FAM109BQ6ICB4 259 aaPredicted RBP12.8□□□□□ -0.36
SSPN-203ENST00000534829 FAM43AQ8N2R8 423 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
SSPN-203ENST00000534829 FAM161BQ96MY7 647 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
SSPN-203ENST00000534829 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
SSPN-203ENST00000534829 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
SSPN-203ENST00000534829 TMEM265A0A087WTH1 108 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
SSPN-203ENST00000534829 TLR2O60603 784 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 DCTN1Q14203 1278 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 KIF22Q14807 665 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 MAFAQ8NHW3 353 aaPredicted RBP12.79□□□□□ -0.36
SSPN-203ENST00000534829 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
SSPN-203ENST00000534829 UNC93B1Q9H1C4 597 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
SSPN-203ENST00000534829 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
SSPN-203ENST00000534829 SGPL1O95470 568 aa12.78□□□□□ -0.36
SSPN-203ENST00000534829 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
SSPN-203ENST00000534829 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
SSPN-203ENST00000534829 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
SSPN-203ENST00000534829 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
SSPN-203ENST00000534829 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
SSPN-203ENST00000534829 CACNA1AO00555 2505 aa12.78□□□□□ -0.36
SSPN-203ENST00000534829 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
SSPN-203ENST00000534829 SYN1P17600 705 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 OSBPP22059 807 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 CCL15Q16663 113 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
SSPN-203ENST00000534829 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 UBE2OQ9C0C9 1292 aaKnown RBP12.77□□□□□ -0.37
SSPN-203ENST00000534829 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 GGA1Q9UJY5 639 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
SSPN-203ENST00000534829 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
SSPN-203ENST00000534829 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms