RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 USP17L1Q7RTZ2 530 aa16.12■□□□□ 0.17
CCS-209ENST00000534763 TXNRD3Q86VQ6 643 aa16.12■□□□□ 0.17
CCS-209ENST00000534763 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
CCS-209ENST00000534763 HELBQ8NG08 1087 aaPredicted RBP16.12■□□□□ 0.17
CCS-209ENST00000534763 PUS3Q9BZE2 481 aaKnown RBP16.12■□□□□ 0.17
CCS-209ENST00000534763 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
CCS-209ENST00000534763 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
CCS-209ENST00000534763 PDE8BO95263 885 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 HSPA6P17066 643 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 EPS15P42566 896 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 STRIP1Q5VSL9 837 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
CCS-209ENST00000534763 H7C1D1 291 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 RLBP1P12271 317 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 IL1R1P14778 569 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
CCS-209ENST00000534763 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 CD209Q9NNX6 404 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
CCS-209ENST00000534763 MYO3BQ8WXR4 1341 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
CCS-209ENST00000534763 A0A1B0GUL6 1792 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 PLIN1O60240 522 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 KLRK1P26718 216 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 IL15P40933 162 aaPredicted RBP16.09■□□□□ 0.17
CCS-209ENST00000534763 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
CCS-209ENST00000534763 ZC3H15Q8WU90 426 aaKnown RBP16.09■□□□□ 0.17
CCS-209ENST00000534763 GMLQ99445 158 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 PGAP2Q9UHJ9 254 aa16.09■□□□□ 0.17
CCS-209ENST00000534763 SNAP23O00161 211 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.16
CCS-209ENST00000534763 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
CCS-209ENST00000534763 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
CCS-209ENST00000534763 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
CCS-209ENST00000534763 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
CCS-209ENST00000534763 FGFR2P21802 821 aa16.07■□□□□ 0.16
CCS-209ENST00000534763 APLP1P51693 650 aa16.07■□□□□ 0.16
CCS-209ENST00000534763 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
CCS-209ENST00000534763 FKBP1AP62942 108 aaKnown RBP16.07■□□□□ 0.16
CCS-209ENST00000534763 TTLL5Q6EMB2 1281 aa16.07■□□□□ 0.16
CCS-209ENST00000534763 PSME4Q14997 1843 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 ZBTB22O15209 634 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 SASH1O94885 1247 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 HIBADHP31937 336 aaKnown RBP16.06■□□□□ 0.16
CCS-209ENST00000534763 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
CCS-209ENST00000534763 FBXO33Q7Z6M2 555 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 PANK1Q8TE04 598 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 LPIN2Q92539 896 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
CCS-209ENST00000534763 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
CCS-209ENST00000534763 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
CCS-209ENST00000534763 IFIT1P09914 478 aaKnown RBP16.05■□□□□ 0.16
CCS-209ENST00000534763 USP17L8P0C7I0 530 aa16.05■□□□□ 0.16
CCS-209ENST00000534763 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
CCS-209ENST00000534763 POLA2Q14181 598 aa16.05■□□□□ 0.16
CCS-209ENST00000534763 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
CCS-209ENST00000534763 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
CCS-209ENST00000534763 FAM205AQ6ZU69 1335 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 PASKQ96RG2 1323 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 HIRAP54198 1017 aaPredicted RBP16.04■□□□□ 0.16
CCS-209ENST00000534763 GTF2IP78347 998 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 SSH3Q8TE77 659 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 SIL1Q9H173 461 aa16.04■□□□□ 0.16
CCS-209ENST00000534763 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
CCS-209ENST00000534763 SLC5A1P13866 664 aa16.03■□□□□ 0.16
CCS-209ENST00000534763 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
CCS-209ENST00000534763 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
CCS-209ENST00000534763 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
CCS-209ENST00000534763 GYG1P46976 350 aa16.02■□□□□ 0.16
CCS-209ENST00000534763 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.16
CCS-209ENST00000534763 TRPM4Q8TD43 1214 aa16.02■□□□□ 0.16
CCS-209ENST00000534763 AKAP2Q9Y2D5 859 aa16.02■□□□□ 0.16
CCS-209ENST00000534763 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 ATP2B3Q16720 1220 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 MAP1SQ66K74 1059 aaPredicted RBP16.01■□□□□ 0.15
CCS-209ENST00000534763 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
CCS-209ENST00000534763 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
CCS-209ENST00000534763 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
CCS-209ENST00000534763 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
CCS-209ENST00000534763 G3BP1Q13283 466 aaKnown RBP eCLIP16■□□□□ 0.15
CCS-209ENST00000534763 TBC1D10BQ4KMP7 808 aaPredicted RBP16■□□□□ 0.15
CCS-209ENST00000534763 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms