RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 GAS2L1Q99501 681 aaPredicted RBP5.08□□□□□ -1.6
ME3-211ENST00000534638 TIMMDC1Q9NPL8 285 aa5.08□□□□□ -1.6
ME3-211ENST00000534638 TMEM63CQ9P1W3 806 aa5.08□□□□□ -1.6
ME3-211ENST00000534638 FAN1Q9Y2M0 1017 aa5.08□□□□□ -1.6
ME3-211ENST00000534638 PPP1R12AO14974 1030 aaPredicted RBP5.07□□□□□ -1.6
ME3-211ENST00000534638 GRM2Q14416 872 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 TMED8Q6PL24 325 aaPredicted RBP5.07□□□□□ -1.6
ME3-211ENST00000534638 RIPOR1Q6ZS17 1223 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 LILRB2Q8N423 598 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 CELF2-AS1Q8N7Q2 184 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 CPLX3Q8WVH0 158 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 HSH2DQ96JZ2 352 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 DNAJC7Q99615 494 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 SLKQ9H2G2 1235 aaPredicted RBP5.07□□□□□ -1.6
ME3-211ENST00000534638 ZFYVE28Q9HCC9 887 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 DYRK1BQ9Y463 629 aa5.07□□□□□ -1.6
ME3-211ENST00000534638 CCDC194A0A1B0GVG4 234 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 EREGO14944 169 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 SMAD7O15105 426 aaKnown RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 EIF4A3P38919 411 aaKnown RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 PLA2G4AP47712 749 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 IDH3AP50213 366 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 CCDC85BQ15834 202 aaPredicted RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 C4orf17Q53FE4 359 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 PPARGC1BQ86YN6 1023 aaKnown RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 CMTR1Q8N1G2 835 aaKnown RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 ZNF280CQ8ND82 737 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 JDP2Q8WYK2 163 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 CNTNAP3BQ96NU0 1288 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 CNTNAP3Q9BZ76 1288 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 MYH16Q9H6N6 1097 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 ST7Q9NRC1 585 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 UBP1Q9NZI7 540 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 PRR12Q9ULL5 1215 aa5.06□□□□□ -1.6
ME3-211ENST00000534638 R3HCC1Q9Y3T6 440 aaKnown RBP5.06□□□□□ -1.6
ME3-211ENST00000534638 UBAP1LF5GYI3 381 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 TGFBR3LH3BV60 316 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 F11P03951 625 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 RPLP1P05386 114 aaKnown RBP5.05□□□□□ -1.6
ME3-211ENST00000534638 SOX9P48436 509 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 GYS2P54840 703 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 EVA1CP58658 441 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 KRT76Q01546 638 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 MAP3K10Q02779 954 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 DBN1Q16643 649 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 TKFCQ3LXA3 575 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 GORABQ5T7V8 394 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 FBXL19Q6PCT2 694 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 RELL1Q8IUW5 271 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 FMNL3Q8IVF7 1028 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 TRIM22Q8IYM9 498 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 RHBDD1Q8TEB9 315 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 APPBP2Q92624 585 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 RSRP1Q9BUV0 290 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 CHRDQ9H2X0 955 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 GPAMQ9HCL2 828 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 FAM13BQ9NYF5 915 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 PRKAG3Q9UGI9 489 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 PPT2Q9UMR5 302 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 TLR6Q9Y2C9 796 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 PRKAB1Q9Y478 270 aa5.05□□□□□ -1.6
ME3-211ENST00000534638 A0A1B0GTH6 734 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 H7C1W4 665 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 TRIM37O94972 964 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 PDGFRBP09619 1106 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 HCLS1P14317 486 aaPredicted RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 GSTT1P30711 240 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 CRKP46108 304 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 FCGRTP55899 365 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 SEPT6Q14141 434 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 RNFT1Q5M7Z0 435 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 CCDC146Q8IYE0 955 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 FAM169BQ8N8A8 192 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 C1orf127Q8N9H9 656 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 ZSCAN1Q8NBB4 408 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 C3orf58Q8NDZ4 430 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 ZNF837Q96EG3 531 aaPredicted RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 GMCL1Q96IK5 515 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 TMEM74Q96NL1 305 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 NOC4LQ9BVI4 516 aaKnown RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 SRRTQ9BXP5 876 aaKnown RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 NIFKQ9BYG3 293 aaKnown RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 SRCIN1Q9C0H9 1055 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 SUV39H2Q9H5I1 410 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 ELP3Q9H9T3 547 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 LATS2Q9NRM7 1088 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 STRIP2Q9ULQ0 834 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 LEMD3Q9Y2U8 911 aa5.04□□□□□ -1.6
ME3-211ENST00000534638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.04□□□□□ -1.6
ME3-211ENST00000534638 PF4P02776 101 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 MSX1P28360 303 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 SQSTM1Q13501 440 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 SNAP47Q5SQN1 464 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 ODR4Q5SWX8 454 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 PCNX4Q63HM2 1172 aa5.03□□□□□ -1.6
ME3-211ENST00000534638 GALNT12Q8IXK2 581 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms