RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
VPS11-205ENST00000534551 KIF3CO14782 793 aa17.45■□□□□ 0.38
VPS11-205ENST00000534551 ZNF609O15014 1411 aa17.45■□□□□ 0.38
VPS11-205ENST00000534551 PSMD14O00487 310 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 CIAO1O76071 339 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 GYG1P46976 350 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 SCNN1DP51172 638 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 CIAPIN1Q6FI81 312 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 MXD3Q9BW11 206 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
VPS11-205ENST00000534551 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
VPS11-205ENST00000534551 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
VPS11-205ENST00000534551 G3V3G9 751 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 PDE8BO95263 885 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 GPC2Q8N158 579 aa17.43■□□□□ 0.38
VPS11-205ENST00000534551 COL1A1P02452 1464 aaPredicted RBP17.43■□□□□ 0.38
VPS11-205ENST00000534551 FGFR2P21802 821 aa17.42■□□□□ 0.38
VPS11-205ENST00000534551 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
VPS11-205ENST00000534551 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
VPS11-205ENST00000534551 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
VPS11-205ENST00000534551 L3MBTL3Q96JM7 780 aaPredicted RBP17.42■□□□□ 0.38
VPS11-205ENST00000534551 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
VPS11-205ENST00000534551 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
VPS11-205ENST00000534551 ADORA1P30542 326 aa17.41■□□□□ 0.38
VPS11-205ENST00000534551 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
VPS11-205ENST00000534551 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
VPS11-205ENST00000534551 TFCP2Q12800 502 aa17.41■□□□□ 0.38
VPS11-205ENST00000534551 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
VPS11-205ENST00000534551 CD209Q9NNX6 404 aa17.41■□□□□ 0.38
VPS11-205ENST00000534551 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
VPS11-205ENST00000534551 SASH1O94885 1247 aa17.4■□□□□ 0.38
VPS11-205ENST00000534551 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
VPS11-205ENST00000534551 COA1Q9GZY4 146 aa17.4■□□□□ 0.38
VPS11-205ENST00000534551 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
VPS11-205ENST00000534551 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
VPS11-205ENST00000534551 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
VPS11-205ENST00000534551 EPS15P42566 896 aa17.39■□□□□ 0.37
VPS11-205ENST00000534551 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
VPS11-205ENST00000534551 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
VPS11-205ENST00000534551 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
VPS11-205ENST00000534551 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
VPS11-205ENST00000534551 BCAMP50895 628 aa17.38■□□□□ 0.37
VPS11-205ENST00000534551 OS9Q13438 667 aaPredicted RBP17.38■□□□□ 0.37
VPS11-205ENST00000534551 ZNF804AQ7Z570 1209 aa17.38■□□□□ 0.37
VPS11-205ENST00000534551 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
VPS11-205ENST00000534551 POLR2AP24928 1970 aaKnown RBP17.37■□□□□ 0.37
VPS11-205ENST00000534551 EGFRP00533 1210 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 SLC5A1P13866 664 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
VPS11-205ENST00000534551 GTF2IP78347 998 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■■□ 23
VPS11-205ENST00000534551 DACT2Q5SW24 774 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 PODNQ7Z5L7 613 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 GPRC5DQ9NZD1 345 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 ECM29Q5VYK3 1845 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
VPS11-205ENST00000534551 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 APBB1O00213 710 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 VIL1P09327 827 aaKnown RBP17.36■□□□□ 0.37
VPS11-205ENST00000534551 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
VPS11-205ENST00000534551 IL1R1P14778 569 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
VPS11-205ENST00000534551 EPHX2P34913 555 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 PHKA1P46020 1223 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 TIMM10P62072 90 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 TNIP1Q15025 636 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 RSBN1LQ6PCB5 846 aaPredicted RBP17.36■□□□□ 0.37
VPS11-205ENST00000534551 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 MICALL2Q8IY33 904 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 LPIN2Q92539 896 aa17.36■□□□□ 0.37
VPS11-205ENST00000534551 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
VPS11-205ENST00000534551 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
VPS11-205ENST00000534551 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
VPS11-205ENST00000534551 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
VPS11-205ENST00000534551 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
VPS11-205ENST00000534551 CHAF1AQ13111 956 aaPredicted RBP17.34■□□□□ 0.37
VPS11-205ENST00000534551 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
VPS11-205ENST00000534551 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
VPS11-205ENST00000534551 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
VPS11-205ENST00000534551 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
VPS11-205ENST00000534551 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
VPS11-205ENST00000534551 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
VPS11-205ENST00000534551 TLR7Q9NYK1 1049 aaKnown RBP17.34■□□□□ 0.37
VPS11-205ENST00000534551 GRIK5Q16478 980 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms