RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	LRRC69	Q6ZNQ3	347 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	NOL8	Q76FK4	1167 aa	Known RBP	5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	FILIP1	Q7Z7B0	1213 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	PHC3	Q8NDX5	983 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	DEPDC7	Q96QD5	511 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	ZIC5	Q96T25	663 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	BRINP2	Q9C0B6	783 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	ABI2	Q9NYB9	513 aa	Predicted RBP	5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	KANSL3	Q9P2N6	904 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	TLR6	Q9Y2C9	796 aa		5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	NOP58	Q9Y2X3	529 aa	Known RBP	5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	GPC6	Q9Y625	555 aa	Predicted RBP	5.77	□□□□□ -1.49
PICALM-222	ENST00000534375	SPATA31C2	B4DYI2	1134 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	GREM1	O60565	184 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	EIF5B	O60841	1220 aa	Known RBP	5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	XYLB	O75191	536 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	CELA3A	P09093	270 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	GTF2E1	P29083	439 aa	Predicted RBP	5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	PLEKHG4	Q58EX7	1191 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	PRPF40B	Q6NWY9	871 aa	Known RBP	5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	BICDL1	Q6ZP65	573 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	RELL1	Q8IUW5	271 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	FAM169B	Q8N8A8	192 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	POLR3GL	Q9BT43	218 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	NT5C1A	Q9BXI3	368 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	OXCT2	Q9BYC2	517 aa	Predicted RBP	5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	PCDH12	Q9NPG4	1184 aa		5.76	□□□□□ -1.49
PICALM-222	ENST00000534375	SLC35F4	A4IF30	521 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	TAT	P17735	454 aa	Predicted RBP	5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CTSO	P43234	321 aa	Predicted RBP	5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	RNF187	Q5TA31	235 aa	Predicted RBP	5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	PCNX4	Q63HM2	1172 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CCDC81	Q6ZN84	652 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	LILRB2	Q8N423	598 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CCDC155	Q8N6L0	562 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CELF2-AS1	Q8N7Q2	184 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	ANKRD24	Q8TF21	1146 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	NANOS1	Q8WY41	292 aa	Known RBP	5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	ANAPC16	Q96DE5	110 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	SHD	Q96IW2	340 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CNTNAP3B	Q96NU0	1288 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	TRIM55	Q9BYV6	548 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CNTNAP3	Q9BZ76	1288 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	EHD4	Q9H223	541 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	POLM	Q9NP87	494 aa	Predicted RBP	5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	PRKAG3	Q9UGI9	489 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	SALL4	Q9UJQ4	1053 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	STRIP2	Q9ULQ0	834 aa		5.75	□□□□□ -1.49
PICALM-222	ENST00000534375	CCDC85C	A6NKD9	419 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	SMAD7	O15105	426 aa	Known RBP	5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	PARN	O95453	639 aa	Known RBP	5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	EGFR	P00533	1210 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	PF4	P02776	101 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	ACPP	P15309	386 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	LIG3	P49916	1009 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	POU4F2	Q12837	409 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	PWP1	Q13610	501 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	NLRP13	Q86W25	1043 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	SH3TC2	Q8TF17	1288 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	STAG1	Q8WVM7	1258 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	TCF12	Q99081	682 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	KRTAP4-8	Q9BYQ9	185 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	FANCL	Q9NW38	375 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	ANKIB1	Q9P2G1	1089 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	PPM1H	Q9ULR3	514 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	MSRB2	Q9Y3D2	182 aa		5.74	□□□□□ -1.49
PICALM-222	ENST00000534375	TMEM238L	A0A1B0GVL6	79 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	CES1	P23141	567 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	ANAPC15	P60006	121 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	KANK3	Q6NY19	840 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	TPTE2	Q6XPS3	522 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	DHX37	Q8IY37	1157 aa	Known RBP	5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	GPR161	Q8N6U8	529 aa	Known RBP	5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	RNF217	Q8TC41	542 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	SRRT	Q9BXP5	876 aa	Known RBP	5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	PPT2	Q9UMR5	302 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	TRAK1	Q9UPV9	953 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	AKAP2	Q9Y2D5	859 aa		5.73	□□□□□ -1.49
PICALM-222	ENST00000534375	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.73	□□□□□ -1.49
PICALM-222	ENST00000534375		A0A1W2PNR3	127 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	ESYT3	A0FGR9	886 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	DNAJC6	O75061	913 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	CLSTN1	O94985	981 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	TFE3	P19532	575 aa	Predicted RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	IBSP	P21815	317 aa	Predicted RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	ITGA6	P23229	1130 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	AMPD3	Q01432	767 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	CAMK2G	Q13555	558 aa	Predicted RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	COL9A2	Q14055	689 aa	Predicted RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	GRIN2C	Q14957	1233 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	PLEKHG6	Q3KR16	790 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	SV2A	Q7L0J3	742 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	SV2B	Q7L1I2	683 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	GOLM1	Q8NBJ4	401 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	FBXO27	Q8NI29	283 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	ZCRB1	Q8TBF4	217 aa	Known RBP	5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	PLD4	Q96BZ4	506 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	CEP63	Q96MT8	703 aa		5.72	□□□□□ -1.49
PICALM-222	ENST00000534375	DNAJC7	Q99615	494 aa		5.72	□□□□□ -1.49

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