RNA–Protein interactions for RNA: ENST00000534343.1

RRP8-205, Transcript of ribosomal RNA processing 8, humanhuman

TSL 2 BASIC

Gene RRP8, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-205ENST00000534343 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
RRP8-205ENST00000534343 MYD88Q99836 296 aa13.08□□□□□ -0.32
RRP8-205ENST00000534343 HDAC9Q9UKV0 1011 aa13.08□□□□□ -0.32
RRP8-205ENST00000534343 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
RRP8-205ENST00000534343 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
RRP8-205ENST00000534343 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
RRP8-205ENST00000534343 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
RRP8-205ENST00000534343 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
RRP8-205ENST00000534343 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
RRP8-205ENST00000534343 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
RRP8-205ENST00000534343 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
RRP8-205ENST00000534343 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
RRP8-205ENST00000534343 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 FKTNO75072 461 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 ALDH1A1P00352 501 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
RRP8-205ENST00000534343 CTSWP56202 376 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
RRP8-205ENST00000534343 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
RRP8-205ENST00000534343 RBBP6Q7Z6E9 1792 aaKnown RBP13.05□□□□□ -0.32
RRP8-205ENST00000534343 BRCA2P51587 3418 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 NF2P35240 595 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 INHBEP58166 350 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
RRP8-205ENST00000534343 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 SCAF8Q9UPN6 1271 aaKnown RBP13.05□□□□□ -0.32
RRP8-205ENST00000534343 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
RRP8-205ENST00000534343 MYH3P11055 1940 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
RRP8-205ENST00000534343 GNAI1P63096 354 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 PLA2G12BQ9BX93 195 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 GREM2Q9H772 168 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 CENPFP49454 3210 aa13.04□□□□□ -0.32
RRP8-205ENST00000534343 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
RRP8-205ENST00000534343 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
RRP8-205ENST00000534343 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
RRP8-205ENST00000534343 KSR2Q6VAB6 950 aa13.03□□□□□ -0.32
RRP8-205ENST00000534343 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
RRP8-205ENST00000534343 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
RRP8-205ENST00000534343 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
RRP8-205ENST00000534343 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.33
RRP8-205ENST00000534343 H7C1W4 665 aa13.02□□□□□ -0.33
RRP8-205ENST00000534343 SASH1O94885 1247 aa13.02□□□□□ -0.33
RRP8-205ENST00000534343 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
RRP8-205ENST00000534343 WDR43Q15061 677 aaKnown RBP eCLIP13.02□□□□□ -0.33
RRP8-205ENST00000534343 C15orf52Q6ZUT6 534 aaKnown RBP13.02□□□□□ -0.33
RRP8-205ENST00000534343 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
RRP8-205ENST00000534343 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.33
RRP8-205ENST00000534343 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
RRP8-205ENST00000534343 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
RRP8-205ENST00000534343 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
RRP8-205ENST00000534343 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
RRP8-205ENST00000534343 TTLL5Q6EMB2 1281 aa13.01□□□□□ -0.33
RRP8-205ENST00000534343 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
RRP8-205ENST00000534343 ZNF804BA4D1E1 1349 aa13.01□□□□□ -0.33
RRP8-205ENST00000534343 TESPA1A2RU30 521 aaPredicted RBP13□□□□□ -0.33
RRP8-205ENST00000534343 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
RRP8-205ENST00000534343 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
RRP8-205ENST00000534343 CSF1RP07333 972 aa13□□□□□ -0.33
RRP8-205ENST00000534343 CASP7P55210 303 aa13□□□□□ -0.33
RRP8-205ENST00000534343 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
RRP8-205ENST00000534343 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
RRP8-205ENST00000534343 ARMC5Q96C12 935 aa13□□□□□ -0.33
RRP8-205ENST00000534343 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
RRP8-205ENST00000534343 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
RRP8-205ENST00000534343 ECM29Q5VYK3 1845 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
RRP8-205ENST00000534343 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
RRP8-205ENST00000534343 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
RRP8-205ENST00000534343 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
RRP8-205ENST00000534343 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 CD209Q9NNX6 404 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
RRP8-205ENST00000534343 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
RRP8-205ENST00000534343 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
RRP8-205ENST00000534343 KLRK1P26718 216 aa12.98□□□□□ -0.33
RRP8-205ENST00000534343 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
RRP8-205ENST00000534343 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
RRP8-205ENST00000534343 APAF1O14727 1248 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
RRP8-205ENST00000534343 IL1R1P14778 569 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 ITGA6P23229 1130 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 GTF2IP78347 998 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
RRP8-205ENST00000534343 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
RRP8-205ENST00000534343 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms