RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
FOXRED1-218ENST00000534315 KCNQ2O43526 872 aa16.21■□□□□ 0.19
FOXRED1-218ENST00000534315 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
FOXRED1-218ENST00000534315 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
FOXRED1-218ENST00000534315 MYH7P12883 1935 aa16.21■□□□□ 0.19
FOXRED1-218ENST00000534315 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.18
FOXRED1-218ENST00000534315 MCAMP43121 646 aa16.21■□□□□ 0.18
FOXRED1-218ENST00000534315 TMEM87AQ8NBN3 555 aa16.21■□□□□ 0.18
FOXRED1-218ENST00000534315 PDE8BO95263 885 aa16.2■□□□□ 0.18
FOXRED1-218ENST00000534315 ZFYP08048 801 aaPredicted RBP16.2■□□□□ 0.18
FOXRED1-218ENST00000534315 WASHC4Q2M389 1173 aa16.2■□□□□ 0.18
FOXRED1-218ENST00000534315 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
FOXRED1-218ENST00000534315 ATP6V1DQ9Y5K8 247 aa16.2■□□□□ 0.18
FOXRED1-218ENST00000534315 FAM98CQ17RN3 349 aaKnown RBP16.19■□□□□ 0.18
FOXRED1-218ENST00000534315 AK7Q96M32 723 aa16.19■□□□□ 0.18
FOXRED1-218ENST00000534315 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
FOXRED1-218ENST00000534315 LARP1BQ659C4 914 aaKnown RBP16.19■□□□□ 0.18
FOXRED1-218ENST00000534315 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
FOXRED1-218ENST00000534315 E7EWF7 191 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 HMGB1P09429 215 aaKnown RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 APPBP2Q92624 585 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 BRF1Q92994 677 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 DDX60Q8IY21 1712 aaKnown RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 SYCE3A1L190 88 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 FOXP2O15409 715 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 FIBPO43427 364 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 PARP10Q53GL7 1025 aa16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 ZNF512BQ96KM6 892 aaPredicted RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 COL5A3P25940 1745 aaPredicted RBP16.18■□□□□ 0.18
FOXRED1-218ENST00000534315 PDCP20941 246 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 PHKA1P46020 1223 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 FGD1P98174 961 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 PUS7LQ9H0K6 701 aaKnown RBP16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 NIP7Q9Y221 180 aaKnown RBP eCLIP16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 NTSR2O95665 410 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
FOXRED1-218ENST00000534315 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 JAK2O60674 1132 aa16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 FGFR2P21802 821 aa16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
FOXRED1-218ENST00000534315 LPIN2Q92539 896 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■■■□ 24.6
FOXRED1-218ENST00000534315 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 BCL9LQ86UU0 1499 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 GPAA1O43292 621 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 LAMB2P55268 1798 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
FOXRED1-218ENST00000534315 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 ADD2P35612 726 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 SCRN1Q12765 414 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 VPS72Q15906 364 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 MPHOSPH8Q99549 860 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 SNAP23O00161 211 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 PFKFB2O60825 505 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 FGAP02671 866 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 HAND2P61296 217 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 UBE2HP62256 183 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 TTF1Q15361 905 aaPredicted RBP16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
FOXRED1-218ENST00000534315 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 KCNQ4P56696 695 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 TPRNQ4KMQ1 711 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 SLC9C2Q5TAH2 1124 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 ZSCAN25Q6NSZ9 544 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 ZNF831Q5JPB2 1677 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 SLC5A1P13866 664 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 ZNF652Q9Y2D9 606 aa16.13■□□□□ 0.17
FOXRED1-218ENST00000534315 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
FOXRED1-218ENST00000534315 ATRNO75882 1429 aa16.12■□□□□ 0.17
FOXRED1-218ENST00000534315 CSPP1Q1MSJ5 1256 aa16.12■□□□□ 0.17
FOXRED1-218ENST00000534315 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
FOXRED1-218ENST00000534315 PTF1AQ7RTS3 328 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms