RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 GALNT12Q8IXK2 581 aa6.38□□□□□ -1.39
HIPK3-206ENST00000534262 POP1Q99575 1024 aaKnown RBP6.38□□□□□ -1.39
HIPK3-206ENST00000534262 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
HIPK3-206ENST00000534262 CPNE3O75131 537 aaKnown RBP6.37□□□□□ -1.39
HIPK3-206ENST00000534262 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
HIPK3-206ENST00000534262 EDN3P14138 238 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 ACPPP15309 386 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 ERCC3P19447 782 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 CSRNP1Q96S65 589 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 TRIM33Q9UPN9 1127 aa6.37□□□□□ -1.39
HIPK3-206ENST00000534262 RNF225M0QZC1 329 aaPredicted RBP6.36□□□□□ -1.39
HIPK3-206ENST00000534262 TRPA1O75762 1119 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 RASSF7Q02833 373 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 CEP135Q66GS9 1140 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 CACTIN-AS1Q8N1I8 211 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 TMEM102Q8N9M5 508 aaPredicted RBP6.36□□□□□ -1.39
HIPK3-206ENST00000534262 NXPE3Q969Y0 559 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 OSMRQ99650 979 aa6.36□□□□□ -1.39
HIPK3-206ENST00000534262 SMNDC1O75940 238 aaKnown RBP eCLIP6.35□□□□□ -1.39
HIPK3-206ENST00000534262 FMR1Q06787 632 aaKnown RBP eCLIP6.35□□□□□ -1.39
HIPK3-206ENST00000534262 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 KIAA0319Q5VV43 1072 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
HIPK3-206ENST00000534262 DMRTC2Q8IXT2 367 aaPredicted RBP6.35□□□□□ -1.39
HIPK3-206ENST00000534262 CCDC74AQ96AQ1 378 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 ZKSCAN3Q9BRR0 538 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 ADAM19Q9H013 955 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 LATS2Q9NRM7 1088 aa6.35□□□□□ -1.39
HIPK3-206ENST00000534262 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
HIPK3-206ENST00000534262 A0A1W2PP55 124 aa6.34□□□□□ -1.39
HIPK3-206ENST00000534262 PDE2AO00408 941 aaPredicted RBP6.34□□□□□ -1.39
HIPK3-206ENST00000534262 ENOX2Q16206 610 aaKnown RBP6.34□□□□□ -1.39
HIPK3-206ENST00000534262 ALYREFQ86V81 257 aaKnown RBP6.34□□□□□ -1.39
HIPK3-206ENST00000534262 WFDC8Q8IUA0 241 aa6.34□□□□□ -1.39
HIPK3-206ENST00000534262 DCAF5Q96JK2 942 aa6.34□□□□□ -1.39
HIPK3-206ENST00000534262 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
HIPK3-206ENST00000534262 ANKRD33BA6NCL7 494 aa6.33□□□□□ -1.4
HIPK3-206ENST00000534262 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
HIPK3-206ENST00000534262 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
HIPK3-206ENST00000534262 IL22RA1Q8N6P7 574 aa6.33□□□□□ -1.4
HIPK3-206ENST00000534262 BHLHE41Q9C0J9 482 aaPredicted RBP6.33□□□□□ -1.4
HIPK3-206ENST00000534262 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
HIPK3-206ENST00000534262 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 CDC27P30260 824 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 TRIM28Q13263 835 aaKnown RBP6.32□□□□□ -1.4
HIPK3-206ENST00000534262 COL19A1Q14993 1142 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 CCNJLQ8IV13 435 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 EPS8L3Q8TE67 593 aaKnown RBP6.32□□□□□ -1.4
HIPK3-206ENST00000534262 TCF12Q99081 682 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 MUC3BQ9H195 1237 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 SH2B1Q9NRF2 756 aaPredicted RBP6.32□□□□□ -1.4
HIPK3-206ENST00000534262 PPME1Q9Y570 386 aa6.32□□□□□ -1.4
HIPK3-206ENST00000534262 PNMA6FA0A0J9YX94 578 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 TM4SF5O14894 197 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 DEAF1O75398 565 aaPredicted RBP6.31□□□□□ -1.4
HIPK3-206ENST00000534262 GDF11O95390 407 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 SPATA31C1P0DKV0 1188 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 PTPRAP18433 802 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 FMR1NBQ8N0W7 255 aaPredicted RBP6.31□□□□□ -1.4
HIPK3-206ENST00000534262 TMEM151AQ8N4L1 468 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 SOX13Q9UN79 622 aa6.31□□□□□ -1.4
HIPK3-206ENST00000534262 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 ITGB2P05107 769 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 P4HBP07237 508 aaKnown RBP6.3□□□□□ -1.4
HIPK3-206ENST00000534262 EPHA1P21709 976 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 VAMP1P23763 118 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 MAPK8P45983 427 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 BSNDQ8WZ55 320 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 PUS7Q96PZ0 661 aaKnown RBP6.3□□□□□ -1.4
HIPK3-206ENST00000534262 SETDB2Q96T68 719 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 WWC3Q9ULE0 1092 aa6.3□□□□□ -1.4
HIPK3-206ENST00000534262 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 ELNP15502 786 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 GRIA4P48058 902 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 RAC1P63000 192 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 GRIK4Q16099 956 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 PI16Q6UXB8 463 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 FBF1Q8TES7 1133 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 MRRFQ96E11 262 aaKnown RBP6.29□□□□□ -1.4
HIPK3-206ENST00000534262 LIN7BQ9HAP6 207 aa6.29□□□□□ -1.4
HIPK3-206ENST00000534262 A0A096LPE4 126 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 A0A1W2PPZ6 126 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 DLL1O00548 723 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 GRM2Q14416 872 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 SPRED3Q2MJR0 410 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
HIPK3-206ENST00000534262 ALG1LQ6GMV1 187 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 PRPF40BQ6NWY9 871 aaKnown RBP6.28□□□□□ -1.4
HIPK3-206ENST00000534262 MAP4K3Q8IVH8 894 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms