RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 WDR4P57081 412 aaKnown RBP7.92□□□□□ -1.14
CMTM1-220ENST00000534143 EXOSC9Q06265 439 aaKnown RBP7.92□□□□□ -1.14
CMTM1-220ENST00000534143 TEFQ10587 303 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
CMTM1-220ENST00000534143 ZBTB33Q86T24 672 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 OCSTAMPQ9BR26 566 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 BCL11AQ9H165 835 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 MIS18AQ9NYP9 233 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 LAS1LQ9Y4W2 734 aaKnown RBP7.92□□□□□ -1.14
CMTM1-220ENST00000534143 NR3C2P08235 984 aa7.91□□□□□ -1.14
CMTM1-220ENST00000534143 CT47B1P0C2W7 299 aaPredicted RBP7.91□□□□□ -1.14
CMTM1-220ENST00000534143 MARCH10Q8NA82 808 aaPredicted RBP7.91□□□□□ -1.14
CMTM1-220ENST00000534143 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
CMTM1-220ENST00000534143 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
CMTM1-220ENST00000534143 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
CMTM1-220ENST00000534143 TSPYL4Q9UJ04 414 aa7.91□□□□□ -1.14
CMTM1-220ENST00000534143 RNF123Q5XPI4 1314 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 BTBD11A6QL63 1104 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 KCNQ3O43525 872 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 VAMP4O75379 141 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 CABP4P57796 275 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 TSPYL6Q8N831 410 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 C8orf58Q8NAV2 365 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 RCAN3Q9UKA8 241 aa7.9□□□□□ -1.14
CMTM1-220ENST00000534143 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
CMTM1-220ENST00000534143 HEG1Q9ULI3 1381 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 FSHRP23945 695 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 EIF4A1P60842 406 aaKnown RBP7.89□□□□□ -1.15
CMTM1-220ENST00000534143 KRT24Q2M2I5 525 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 SEPT12Q8IYM1 358 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
CMTM1-220ENST00000534143 DOT1LQ8TEK3 1739 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 PAPPAQ13219 1627 aa7.89□□□□□ -1.15
CMTM1-220ENST00000534143 KAT6BQ8WYB5 2073 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 BCL9O00512 1426 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 SOS1Q07889 1333 aaPredicted RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 ZIC2O95409 532 aaPredicted RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 BMP1P13497 986 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 SNRPBP14678 240 aaKnown RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 RARSP54136 660 aaKnown RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 ZNF790Q6PG37 636 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 ZNF428Q96B54 188 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 ITPKCQ96DU7 683 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 UBR2Q8IWV8 1755 aa7.88□□□□□ -1.15
CMTM1-220ENST00000534143 TNS1Q9HBL0 1735 aaKnown RBP7.88□□□□□ -1.15
CMTM1-220ENST00000534143 SBF2Q86WG5 1849 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 ELL2O00472 640 aaPredicted RBP7.87□□□□□ -1.15
CMTM1-220ENST00000534143 ALDH1L2Q3SY69 923 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 MRPL14Q6P1L8 145 aaKnown RBP7.87□□□□□ -1.15
CMTM1-220ENST00000534143 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 PIGBQ92521 554 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
CMTM1-220ENST00000534143 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 TMOD3Q9NYL9 352 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 CACNA1FO60840 1977 aa7.87□□□□□ -1.15
CMTM1-220ENST00000534143 GIGYF1O75420 1035 aaPredicted RBP7.86□□□□□ -1.15
CMTM1-220ENST00000534143 BCAR3O75815 825 aa7.86□□□□□ -1.15
CMTM1-220ENST00000534143 HOXB7P09629 217 aa7.86□□□□□ -1.15
CMTM1-220ENST00000534143 SSH1Q8WYL5 1049 aa7.86□□□□□ -1.15
CMTM1-220ENST00000534143 ATG3Q9NT62 314 aa7.86□□□□□ -1.15
CMTM1-220ENST00000534143 KCPQ6ZWJ8 1503 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 RRP1P56182 461 aaKnown RBP7.85□□□□□ -1.15
CMTM1-220ENST00000534143 DEFB132Q7Z7B7 95 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
CMTM1-220ENST00000534143 ZFP42Q96MM3 310 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 SNRKQ9NRH2 765 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 ASAP1Q9ULH1 1129 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 C5P01031 1676 aa7.85□□□□□ -1.15
CMTM1-220ENST00000534143 NHSQ6T4R5 1651 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 PRAMEF22A3QJZ6 481 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 KCNQ2O43526 872 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 SCARF1Q14162 830 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 FAM182BQ5T319 152 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 KRT27Q7Z3Y8 459 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 CCDC125Q86Z20 511 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 TTC5Q8N0Z6 440 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 FMNL2Q96PY5 1086 aa7.84□□□□□ -1.15
CMTM1-220ENST00000534143 BTAF1O14981 1849 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 PLIN1O60240 522 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 SNRPA1P09661 255 aaKnown RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 DHX9Q08211 1270 aaKnown RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 PPP1R26Q5T8A7 1209 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 CCDC30Q5VVM6 783 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 PTF1AQ7RTS3 328 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-220ENST00000534143 BCL2L13Q9BXK5 485 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 USP16Q9Y5T5 823 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms