RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
CMTM1-219ENST00000533953 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
CMTM1-219ENST00000533953 GYG1P46976 350 aa16.7■□□□□ 0.26
CMTM1-219ENST00000533953 VGLL2Q8N8G2 317 aa16.7■□□□□ 0.26
CMTM1-219ENST00000533953 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
CMTM1-219ENST00000533953 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
CMTM1-219ENST00000533953 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
CMTM1-219ENST00000533953 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 PDE8BO95263 885 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
CMTM1-219ENST00000533953 LMOD1P29536 600 aaPredicted RBP16.69■□□□□ 0.26
CMTM1-219ENST00000533953 MTX1Q13505 466 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 MVPQ14764 893 aaKnown RBP16.69■□□□□ 0.26
CMTM1-219ENST00000533953 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
CMTM1-219ENST00000533953 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
CMTM1-219ENST00000533953 WDR90Q96KV7 1748 aa16.69■□□□□ 0.26
CMTM1-219ENST00000533953 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
CMTM1-219ENST00000533953 UBE4AQ14139 1066 aa16.68■□□□□ 0.26
CMTM1-219ENST00000533953 RBM26Q5T8P6 1007 aaKnown RBP16.68■□□□□ 0.26
CMTM1-219ENST00000533953 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
CMTM1-219ENST00000533953 MICALL2Q8IY33 904 aa16.68■□□□□ 0.26
CMTM1-219ENST00000533953 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
CMTM1-219ENST00000533953 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-219ENST00000533953 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
CMTM1-219ENST00000533953 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-219ENST00000533953 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 EGFRP00533 1210 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 MS4A1P11836 297 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-219ENST00000533953 GTF2IP78347 998 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 C15orf52Q6ZUT6 534 aaKnown RBP16.67■□□□□ 0.26
CMTM1-219ENST00000533953 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 TRPM4Q8TD43 1214 aa16.67■□□□□ 0.26
CMTM1-219ENST00000533953 CIAO1O76071 339 aa16.66■□□□□ 0.26
CMTM1-219ENST00000533953 FGFR2P21802 821 aa16.66■□□□□ 0.26
CMTM1-219ENST00000533953 BCAMP50895 628 aa16.66■□□□□ 0.26
CMTM1-219ENST00000533953 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
CMTM1-219ENST00000533953 DACT2Q5SW24 774 aa16.66■□□□□ 0.26
CMTM1-219ENST00000533953 MAP1SQ66K74 1059 aaPredicted RBP16.66■□□□□ 0.26
CMTM1-219ENST00000533953 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
CMTM1-219ENST00000533953 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
CMTM1-219ENST00000533953 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
CMTM1-219ENST00000533953 TFCP2Q12800 502 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 POLA2Q14181 598 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 GMLQ99445 158 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 SCN9AQ15858 1988 aa16.65■□□□□ 0.26
CMTM1-219ENST00000533953 H7C1D1 291 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
CMTM1-219ENST00000533953 TIMM10P62072 90 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 HTRA3P83110 453 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
CMTM1-219ENST00000533953 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
CMTM1-219ENST00000533953 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.64■□□□□ 0.25
CMTM1-219ENST00000533953 ADARB2Q9NS39 739 aaKnown RBP16.64■□□□□ 0.25
CMTM1-219ENST00000533953 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
CMTM1-219ENST00000533953 IL1R1P14778 569 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 ADORA1P30542 326 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 RRP1P56182 461 aaKnown RBP16.63■□□□□ 0.25
CMTM1-219ENST00000533953 STRIP1Q5VSL9 837 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
CMTM1-219ENST00000533953 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 CERS5Q8N5B7 392 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 TDRD7Q8NHU6 1098 aaKnown RBP16.63■□□□□ 0.25
CMTM1-219ENST00000533953 SSH3Q8TE77 659 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 DPF2Q92785 391 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
CMTM1-219ENST00000533953 ASTN2O75129 1339 aaPredicted RBP16.63■□□□□ 0.25
CMTM1-219ENST00000533953 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
CMTM1-219ENST00000533953 SASH1O94885 1247 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
CMTM1-219ENST00000533953 FSTL1Q12841 308 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 G3BP1Q13283 466 aaKnown RBP eCLIP16.62■□□□□ 0.25
CMTM1-219ENST00000533953 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 DLK2Q6UY11 383 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 SIRT2Q8IXJ6 389 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
CMTM1-219ENST00000533953 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-219ENST00000533953 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 SLC5A1P13866 664 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
CMTM1-219ENST00000533953 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-219ENST00000533953 GRIK5Q16478 980 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-219ENST00000533953 VPS37DQ86XT2 251 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 LPIN2Q92539 896 aa16.61■□□□□ 0.25
CMTM1-219ENST00000533953 HSPA6P17066 643 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms