RNA–Protein interactions for RNA: ENST00000533865.5

CTSC-207, Transcript of cathepsin C, humanhuman

TSL 4

Gene CTSC, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-207ENST00000533865 VAMP4O75379 141 aa13.72□□□□□ -0.21
CTSC-207ENST00000533865 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
CTSC-207ENST00000533865 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
CTSC-207ENST00000533865 GMLQ99445 158 aa13.72□□□□□ -0.21
CTSC-207ENST00000533865 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
CTSC-207ENST00000533865 SCAF8Q9UPN6 1271 aaKnown RBP13.72□□□□□ -0.21
CTSC-207ENST00000533865 GPSM2P81274 684 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 CAP1Q01518 475 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 SREBF2Q12772 1141 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 MKRN3Q13064 507 aaKnown RBP13.71□□□□□ -0.21
CTSC-207ENST00000533865 PDIA6Q15084 440 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.71□□□□□ -0.21
CTSC-207ENST00000533865 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.21
CTSC-207ENST00000533865 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
CTSC-207ENST00000533865 RCAN3Q9UKA8 241 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 PTPN22Q9Y2R2 807 aa13.71□□□□□ -0.21
CTSC-207ENST00000533865 H0YGN5 161 aa13.7□□□□□ -0.22
CTSC-207ENST00000533865 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
CTSC-207ENST00000533865 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
CTSC-207ENST00000533865 HYPKQ9NX55 129 aa13.7□□□□□ -0.22
CTSC-207ENST00000533865 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
CTSC-207ENST00000533865 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
CTSC-207ENST00000533865 MS4A1P11836 297 aa13.69□□□□□ -0.22
CTSC-207ENST00000533865 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
CTSC-207ENST00000533865 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
CTSC-207ENST00000533865 AGBL3Q8NEM8 1001 aa13.69□□□□□ -0.22
CTSC-207ENST00000533865 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
CTSC-207ENST00000533865 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
CTSC-207ENST00000533865 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
CTSC-207ENST00000533865 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
CTSC-207ENST00000533865 RARSP54136 660 aaKnown RBP13.68□□□□□ -0.22
CTSC-207ENST00000533865 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
CTSC-207ENST00000533865 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
CTSC-207ENST00000533865 MYOZ2Q9NPC6 264 aa13.68□□□□□ -0.22
CTSC-207ENST00000533865 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 ALDH1A1P00352 501 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 LDLRAD1Q5T700 205 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 SPRYD7Q5W111 196 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 SMC4Q9NTJ3 1288 aa13.67□□□□□ -0.22
CTSC-207ENST00000533865 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
CTSC-207ENST00000533865 SF3B3Q15393 1217 aaKnown RBP13.66□□□□□ -0.22
CTSC-207ENST00000533865 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 IFNL1Q8IU54 200 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 EYA3Q99504 573 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
CTSC-207ENST00000533865 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
CTSC-207ENST00000533865 PTPRCP08575 1304 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTSC-207ENST00000533865 DDX58O95786 925 aaKnown RBP13.65□□□□□ -0.22
CTSC-207ENST00000533865 ANXA1P04083 346 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 KRT24Q2M2I5 525 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
CTSC-207ENST00000533865 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
CTSC-207ENST00000533865 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
CTSC-207ENST00000533865 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
CTSC-207ENST00000533865 TTLL12Q14166 644 aaPredicted RBP13.64□□□□□ -0.23
CTSC-207ENST00000533865 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
CTSC-207ENST00000533865 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
CTSC-207ENST00000533865 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
CTSC-207ENST00000533865 ZSWIM8A7E2V4 1837 aa13.63□□□□□ -0.23
CTSC-207ENST00000533865 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
CTSC-207ENST00000533865 INHBEP58166 350 aa13.63□□□□□ -0.23
CTSC-207ENST00000533865 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
CTSC-207ENST00000533865 API5Q9BZZ5 524 aaKnown RBP13.63□□□□□ -0.23
CTSC-207ENST00000533865 EFCC1Q9HA90 598 aa13.63□□□□□ -0.23
CTSC-207ENST00000533865 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
CTSC-207ENST00000533865 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
CTSC-207ENST00000533865 WNT10BO00744 389 aa13.62□□□□□ -0.23
CTSC-207ENST00000533865 CRHR2Q13324 411 aa13.62□□□□□ -0.23
CTSC-207ENST00000533865 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
CTSC-207ENST00000533865 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
CTSC-207ENST00000533865 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
CTSC-207ENST00000533865 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
CTSC-207ENST00000533865 RPS8P62241 208 aaKnown RBP13.61□□□□□ -0.23
CTSC-207ENST00000533865 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
CTSC-207ENST00000533865 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
CTSC-207ENST00000533865 FZD1Q9UP38 647 aa13.61□□□□□ -0.23
CTSC-207ENST00000533865 LAMA2P24043 3122 aaKnown RBP13.61□□□□□ -0.23
CTSC-207ENST00000533865 UFL1O94874 794 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 ZBTB48P10074 688 aaPredicted RBP13.6□□□□□ -0.23
CTSC-207ENST00000533865 NF2P35240 595 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 FLIIQ13045 1269 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 PRKG1Q13976 671 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 ARMC9Q7Z3E5 817 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
CTSC-207ENST00000533865 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
CTSC-207ENST00000533865 EYSQ5T1H1 3165 aa13.59□□□□□ -0.23
CTSC-207ENST00000533865 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
CTSC-207ENST00000533865 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
CTSC-207ENST00000533865 SP3Q02447 781 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms