RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PAG1Q9NWQ8 432 aa22.65■■□□□ 1.22
CAPN1-226ENST00000533820 ADGRL3Q9HAR2 1447 aa22.65■■□□□ 1.22
CAPN1-226ENST00000533820 CCDC73Q6ZRK6 1079 aa22.65■■□□□ 1.22
CAPN1-226ENST00000533820 TRMT1Q9NXH9 659 aaKnown RBP22.65■■□□□ 1.22
CAPN1-226ENST00000533820 FKBP4Q02790 459 aaKnown RBP eCLIP22.64■■□□□ 1.22
CAPN1-226ENST00000533820 LRRC24Q50LG9 513 aa22.64■■□□□ 1.22
CAPN1-226ENST00000533820 ZBTB3Q9H5J0 574 aa22.64■■□□□ 1.22
CAPN1-226ENST00000533820 ADD1P35611 737 aaKnown RBP22.64■■□□□ 1.21
CAPN1-226ENST00000533820 RBM43Q6ZSC3 357 aaKnown RBP22.64■■□□□ 1.21
CAPN1-226ENST00000533820 FSIP1Q8NA03 581 aa22.64■■□□□ 1.21
CAPN1-226ENST00000533820 ZSCAN16Q9H4T2 348 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-226ENST00000533820 GJB4Q9NTQ9 266 aa22.64■■□□□ 1.21
CAPN1-226ENST00000533820 USP27XA6NNY8 438 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 TTLL7Q6ZT98 887 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 CYP27B1O15528 508 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 KINO60870 393 aaKnown RBP22.63■■□□□ 1.21
CAPN1-226ENST00000533820 POLR3DP05423 398 aaPredicted RBP22.63■■□□□ 1.21
CAPN1-226ENST00000533820 FER1L4A9Z1Z3 1794 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 PFKFB2O60825 505 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 CABP4P57796 275 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 LRP10Q7Z4F1 713 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 FMNL2Q96PY5 1086 aa22.63■■□□□ 1.21
CAPN1-226ENST00000533820 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
CAPN1-226ENST00000533820 TEX2Q8IWB9 1127 aa22.62■■□□□ 1.21
CAPN1-226ENST00000533820 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.62■■□□□ 1.21
CAPN1-226ENST00000533820 V9GYY5 206 aaPredicted RBP22.62■■□□□ 1.21
CAPN1-226ENST00000533820 JCADQ9P266 1359 aa22.62■■□□□ 1.21
CAPN1-226ENST00000533820 E7EWF7 191 aa22.62■■□□□ 1.21
CAPN1-226ENST00000533820 A0A1B0GVL5 298 aa22.61■■□□□ 1.21
CAPN1-226ENST00000533820 IQCB1Q15051 598 aa22.61■■□□□ 1.21
CAPN1-226ENST00000533820 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
CAPN1-226ENST00000533820 HSPD1P10809 573 aaKnown RBP22.61■■□□□ 1.21
CAPN1-226ENST00000533820 SDF4Q9BRK5 362 aa22.61■■□□□ 1.21
CAPN1-226ENST00000533820 AOPEPQ8N6M6 819 aa22.61■■□□□ 1.21
CAPN1-226ENST00000533820 SMARCC2Q8TAQ2 1214 aa22.61■■□□□ 1.21
CAPN1-226ENST00000533820 BIN1O00499 593 aa22.6■■□□□ 1.21
CAPN1-226ENST00000533820 IFIT1P09914 478 aaKnown RBP22.6■■□□□ 1.21
CAPN1-226ENST00000533820 RABL6Q3YEC7 729 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-226ENST00000533820 WASHC4Q2M389 1173 aa22.6■■□□□ 1.21
CAPN1-226ENST00000533820 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-226ENST00000533820 A1BGP04217 495 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-226ENST00000533820 ISM2Q6H9L7 571 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 ATG9AQ7Z3C6 839 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 SNW1Q13573 536 aaKnown RBP22.59■■□□□ 1.21
CAPN1-226ENST00000533820 STX1AQ16623 288 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 RCOR1Q9UKL0 485 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
CAPN1-226ENST00000533820 USP54Q70EL1 1684 aa22.59■■□□□ 1.21
CAPN1-226ENST00000533820 PDIA3P30101 505 aaKnown RBP22.59■■□□□ 1.21
CAPN1-226ENST00000533820 NCBP1Q09161 790 aaKnown RBP22.59■■□□□ 1.21
CAPN1-226ENST00000533820 RGPD5Q99666 1765 aa22.58■■□□□ 1.21
CAPN1-226ENST00000533820 SKILP12757 684 aa22.58■■□□□ 1.21
CAPN1-226ENST00000533820 FOXO4P98177 505 aa22.58■■□□□ 1.21
CAPN1-226ENST00000533820 SF3A1Q15459 793 aaKnown RBP22.58■■□□□ 1.21
CAPN1-226ENST00000533820 MAST3O60307 1309 aa22.58■■□□□ 1.21
CAPN1-226ENST00000533820 NBPF26B4DH59 902 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 M0R2C6 588 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 NBPF14Q5TI25 921 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 NBPF10Q6P3W6 841 aaKnown RBP22.58■■□□□ 1.2
CAPN1-226ENST00000533820 ILDR1Q86SU0 546 aaPredicted RBP22.58■■□□□ 1.2
CAPN1-226ENST00000533820 LRRC8AQ8IWT6 810 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 NBPF15Q8N660 670 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 RGS22Q8NE09 1264 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 CCDC112Q8NEF3 446 aa22.58■■□□□ 1.2
CAPN1-226ENST00000533820 NPHP1O15259 732 aa22.57■■□□□ 1.2
CAPN1-226ENST00000533820 GORABQ5T7V8 394 aa22.57■■□□□ 1.2
CAPN1-226ENST00000533820 C5P01031 1676 aa22.57■■□□□ 1.2
CAPN1-226ENST00000533820 A0A1B0GUL7 405 aa22.57■■□□□ 1.2
CAPN1-226ENST00000533820 TRERF1Q96PN7 1200 aa22.57■■□□□ 1.2
CAPN1-226ENST00000533820 PLBD2Q8NHP8 589 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 MEGF6O75095 1541 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 CASP7P55210 303 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 NAA16Q6N069 864 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-226ENST00000533820 PCDHA7Q9UN72 937 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 CCDC69A6NI79 296 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 HMGB1P09429 215 aaKnown RBP22.56■■□□□ 1.2
CAPN1-226ENST00000533820 EXOSC10Q01780 885 aaKnown RBP22.56■■□□□ 1.2
CAPN1-226ENST00000533820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-226ENST00000533820 OSBP2Q969R2 916 aa22.56■■□□□ 1.2
CAPN1-226ENST00000533820 ZNF396Q96N95 335 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-226ENST00000533820 OVOS2A0A0G2JMS6 1433 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 CEP135Q66GS9 1140 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 PI16Q6UXB8 463 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 DHX40Q8IX18 779 aaKnown RBP22.55■■□□□ 1.2
CAPN1-226ENST00000533820 LLPHQ9BRT6 129 aaKnown RBP22.55■■□□□ 1.2
CAPN1-226ENST00000533820 CLIC4Q9Y696 253 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 FDPSP14324 419 aaKnown RBP22.55■■□□□ 1.2
CAPN1-226ENST00000533820 ZMYM1Q5SVZ6 1142 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 DCAF5Q96JK2 942 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 SH3TC1Q8TE82 1336 aa22.55■■□□□ 1.2
CAPN1-226ENST00000533820 CTIFO43310 598 aaKnown RBP22.54■■□□□ 1.2
CAPN1-226ENST00000533820 SMTNL1A8MU46 457 aa22.54■■□□□ 1.2
CAPN1-226ENST00000533820 ADORA1P30542 326 aa22.54■■□□□ 1.2
CAPN1-226ENST00000533820 NDUFA8P51970 172 aa22.54■■□□□ 1.2
CAPN1-226ENST00000533820 STK38Q15208 465 aa22.54■■□□□ 1.2
CAPN1-226ENST00000533820 ANKRD7Q92527 254 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms