RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 GJA5P36382 358 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 TAF1CQ15572 869 aaPredicted RBP14.1□□□□□ -0.15
CSDE1-215ENST00000533818 MAP3K11Q16584 847 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 APOBEC3FQ8IUX4 373 aaKnown RBP14.1□□□□□ -0.15
CSDE1-215ENST00000533818 PHACTR3Q96KR7 559 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 ARHGAP39Q9C0H5 1083 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 SCN9AQ15858 1988 aa14.1□□□□□ -0.15
CSDE1-215ENST00000533818 UFL1O94874 794 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 CCL5P13501 91 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 PRMT2P55345 433 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 RNF208Q9H0X6 261 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 SH3TC1Q8TE82 1336 aa14.09□□□□□ -0.15
CSDE1-215ENST00000533818 LRRC37AA6NMS7 1700 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 UNCXA6NJT0 531 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 SASH1O94885 1247 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 GNRH1P01148 92 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 TAF7Q15545 349 aaPredicted RBP14.08□□□□□ -0.16
CSDE1-215ENST00000533818 NLRP10Q86W26 655 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 ANKIB1Q9P2G1 1089 aa14.08□□□□□ -0.16
CSDE1-215ENST00000533818 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 LACTBP83111 547 aaPredicted RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 U2AF1L4Q8WU68 220 aaKnown RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 SYMPKQ92797 1274 aaKnown RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
CSDE1-215ENST00000533818 BIN2Q9UBW5 565 aaPredicted RBP14.07□□□□□ -0.16
CSDE1-215ENST00000533818 GGA1Q9UJY5 639 aa14.07□□□□□ -0.16
CSDE1-215ENST00000533818 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 TAF1P21675 1872 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 GRK4P32298 578 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 RPS8P62241 208 aaKnown RBP14.06□□□□□ -0.16
CSDE1-215ENST00000533818 DCTN1Q14203 1278 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 TDHQ8IZJ6 230 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 DEFB129Q9H1M3 183 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 IRS2Q9Y4H2 1338 aa14.06□□□□□ -0.16
CSDE1-215ENST00000533818 WDHD1O75717 1129 aaPredicted RBP14.05□□□□□ -0.16
CSDE1-215ENST00000533818 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
CSDE1-215ENST00000533818 PODNQ7Z5L7 613 aa14.05□□□□□ -0.16
CSDE1-215ENST00000533818 MS4A4AQ96JQ5 239 aa14.05□□□□□ -0.16
CSDE1-215ENST00000533818 MXD3Q9BW11 206 aa14.05□□□□□ -0.16
CSDE1-215ENST00000533818 RIPOR2Q9Y4F9 1068 aa14.05□□□□□ -0.16
CSDE1-215ENST00000533818 LAMB2P55268 1798 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 IREB2P48200 963 aaKnown RBP14.04□□□□□ -0.16
CSDE1-215ENST00000533818 SF3B3Q15393 1217 aaKnown RBP14.04□□□□□ -0.16
CSDE1-215ENST00000533818 HSP90AB3PQ58FF7 597 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 BRI3BPQ8WY22 251 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 ZNF428Q96B54 188 aa14.04□□□□□ -0.16
CSDE1-215ENST00000533818 THUMPD2Q9BTF0 503 aaKnown RBP14.04□□□□□ -0.16
CSDE1-215ENST00000533818 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
CSDE1-215ENST00000533818 ZNF646O15015 1829 aaPredicted RBP14.04□□□□□ -0.16
CSDE1-215ENST00000533818 TLR2O60603 784 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 SGPL1O95470 568 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 UBXN2AP68543 259 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 SUPT20HL1Q3ZLR7 823 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 FAM109BQ6ICB4 259 aaPredicted RBP14.03□□□□□ -0.16
CSDE1-215ENST00000533818 ANKRD13AQ8IZ07 590 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 OPTNQ96CV9 577 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 TRIM47Q96LD4 638 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 SRRDQ9UH36 339 aa14.03□□□□□ -0.16
CSDE1-215ENST00000533818 CCL15-CCL14A0A0B4J2E2 113 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 POTEB2H3BUK9 544 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
CSDE1-215ENST00000533818 TFRCP02786 760 aaKnown RBP14.02□□□□□ -0.17
CSDE1-215ENST00000533818 HOXD10P28358 340 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 MAGEA10P43363 369 aaPredicted RBP14.02□□□□□ -0.17
CSDE1-215ENST00000533818 MMP14P50281 582 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 CCL15Q16663 113 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
CSDE1-215ENST00000533818 DACT2Q5SW24 774 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 ELP3Q9H9T3 547 aa14.02□□□□□ -0.17
CSDE1-215ENST00000533818 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
CSDE1-215ENST00000533818 TNFRSF10AO00220 468 aa14.01□□□□□ -0.17
CSDE1-215ENST00000533818 GTF2A2P52657 109 aa14.01□□□□□ -0.17
CSDE1-215ENST00000533818 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
CSDE1-215ENST00000533818 UBE2OQ9C0C9 1292 aaKnown RBP14.01□□□□□ -0.17
CSDE1-215ENST00000533818 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
CSDE1-215ENST00000533818 COL1A1P02452 1464 aaPredicted RBP14□□□□□ -0.17
CSDE1-215ENST00000533818 TMEM265A0A087WTH1 108 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
CSDE1-215ENST00000533818 PSMC4P43686 418 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 MAFAQ8NHW3 353 aaPredicted RBP14□□□□□ -0.17
CSDE1-215ENST00000533818 PAWRQ96IZ0 340 aaKnown RBP14□□□□□ -0.17
CSDE1-215ENST00000533818 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 PPP2R3BQ9Y5P8 575 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 LAMB4A4D0S4 1761 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
CSDE1-215ENST00000533818 PRUNE2Q8WUY3 3088 aa13.99□□□□□ -0.17
CSDE1-215ENST00000533818 FMNL1O95466 1100 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms