RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
PACS1-213ENST00000533756 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
PACS1-213ENST00000533756 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
PACS1-213ENST00000533756 CAPN2P17655 700 aa12.03□□□□□ -0.48
PACS1-213ENST00000533756 MTFR1Q15390 333 aa12.03□□□□□ -0.48
PACS1-213ENST00000533756 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
PACS1-213ENST00000533756 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
PACS1-213ENST00000533756 PTPN18Q99952 460 aa12.03□□□□□ -0.48
PACS1-213ENST00000533756 LAMB1P07942 1786 aa12.02□□□□□ -0.48
PACS1-213ENST00000533756 BCAMP50895 628 aa12.02□□□□□ -0.49
PACS1-213ENST00000533756 ZBTB3Q9H5J0 574 aa12.02□□□□□ -0.49
PACS1-213ENST00000533756 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.49
PACS1-213ENST00000533756 ANKRD36CQ5JPF3 1778 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 G3V3G9 751 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
PACS1-213ENST00000533756 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 FAM109BQ6ICB4 259 aaPredicted RBP12.01□□□□□ -0.49
PACS1-213ENST00000533756 TBC1D16Q8TBP0 767 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 ZFYVE28Q9HCC9 887 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 RAPGEFL1Q9UHV5 662 aa12.01□□□□□ -0.49
PACS1-213ENST00000533756 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
PACS1-213ENST00000533756 WNT10BO00744 389 aa12□□□□□ -0.49
PACS1-213ENST00000533756 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
PACS1-213ENST00000533756 MMP14P50281 582 aa12□□□□□ -0.49
PACS1-213ENST00000533756 GPSM2P81274 684 aa12□□□□□ -0.49
PACS1-213ENST00000533756 KIF22Q14807 665 aa12□□□□□ -0.49
PACS1-213ENST00000533756 TDHQ8IZJ6 230 aa12□□□□□ -0.49
PACS1-213ENST00000533756 GUCD1Q96NT3 240 aa12□□□□□ -0.49
PACS1-213ENST00000533756 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
PACS1-213ENST00000533756 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
PACS1-213ENST00000533756 APOBEC3FQ8IUX4 373 aaKnown RBP11.99□□□□□ -0.49
PACS1-213ENST00000533756 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
PACS1-213ENST00000533756 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
PACS1-213ENST00000533756 TAF1P21675 1872 aa11.99□□□□□ -0.49
PACS1-213ENST00000533756 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 POTEB2H3BUK9 544 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 TNFRSF10AO00220 468 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 CCL5P13501 91 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
PACS1-213ENST00000533756 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
PACS1-213ENST00000533756 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
PACS1-213ENST00000533756 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 WDHD1O75717 1129 aaPredicted RBP11.97□□□□□ -0.49
PACS1-213ENST00000533756 SGPL1O95470 568 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 LACTBP83111 547 aaPredicted RBP11.97□□□□□ -0.49
PACS1-213ENST00000533756 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 PANK3Q9H999 370 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
PACS1-213ENST00000533756 FZD1Q9UP38 647 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 LAMB2P55268 1798 aa11.97□□□□□ -0.49
PACS1-213ENST00000533756 MUC3AQ02505 3323 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 COL1A1P02452 1464 aaPredicted RBP11.96□□□□□ -0.49
PACS1-213ENST00000533756 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 MYL6BP14649 208 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 GRK4P32298 578 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 GJA5P36382 358 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 UBXN2AP68543 259 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
PACS1-213ENST00000533756 ARHGAP39Q9C0H5 1083 aa11.96□□□□□ -0.49
PACS1-213ENST00000533756 SH3TC1Q8TE82 1336 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 TLR2O60603 784 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 HOXD10P28358 340 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 TRIM47Q96LD4 638 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 DEFB129Q9H1M3 183 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 SRRDQ9UH36 339 aa11.95□□□□□ -0.5
PACS1-213ENST00000533756 IREB2P48200 963 aaKnown RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 SUPT20HL1Q3ZLR7 823 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 NLRP10Q86W26 655 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 HELBQ8NG08 1087 aaPredicted RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 RIPOR2Q9Y4F9 1068 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
PACS1-213ENST00000533756 PPP2R3BQ9Y5P8 575 aa11.94□□□□□ -0.5
PACS1-213ENST00000533756 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 MYO3BQ8WXR4 1341 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 UFL1O94874 794 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 MAFAQ8NHW3 353 aaPredicted RBP11.93□□□□□ -0.5
PACS1-213ENST00000533756 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 POLR3GLQ9BT43 218 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 UBE2OQ9C0C9 1292 aaKnown RBP11.93□□□□□ -0.5
PACS1-213ENST00000533756 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 PSME4Q14997 1843 aa11.93□□□□□ -0.5
PACS1-213ENST00000533756 TMEM265A0A087WTH1 108 aa11.92□□□□□ -0.5
PACS1-213ENST00000533756 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
PACS1-213ENST00000533756 SASH1O94885 1247 aa11.92□□□□□ -0.5
PACS1-213ENST00000533756 MAGEA10P43363 369 aaPredicted RBP11.92□□□□□ -0.5
PACS1-213ENST00000533756 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms