RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 A0A1B0GUL6 1792 aa20.34■□□□□ 0.85
PACSIN3-210ENST00000533686 COL4A5P29400 1685 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 G3V3G9 751 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 RAB11FIP3O75154 756 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 SLC5A1P13866 664 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 KLRK1P26718 216 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 ATP2B3Q16720 1220 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 PODNQ7Z5L7 613 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 DCTPP1Q9H773 170 aa20.33■□□□□ 0.85
PACSIN3-210ENST00000533686 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
PACSIN3-210ENST00000533686 DOK7Q18PE1 504 aa20.32■□□□□ 0.84
PACSIN3-210ENST00000533686 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 ECE2O60344 883 aa20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 EIF6P56537 245 aaKnown RBP20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 DBNDD1Q9H9R9 158 aa20.31■□□□□ 0.84
PACSIN3-210ENST00000533686 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 HIBADHP31937 336 aaKnown RBP20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 CAVIN4Q5BKX8 364 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 FBXO33Q7Z6M2 555 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 KIF1BPQ96EK5 621 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 CD209Q9NNX6 404 aa20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
PACSIN3-210ENST00000533686 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
PACSIN3-210ENST00000533686 RWDD1Q9H446 243 aaPredicted RBP20.29■□□□□ 0.84
PACSIN3-210ENST00000533686 GLTPD2A6NH11 291 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 IL1R1P14778 569 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 GYG1P46976 350 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 TIMM10P62072 90 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 CXCL9Q07325 125 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 TNNI3KQ59H18 835 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 FPGT-TNNI3KV9GXZ4 949 aa20.28■□□□□ 0.84
PACSIN3-210ENST00000533686 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 ZBTB22O15209 634 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 YY1P25490 414 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 TNIP1Q15025 636 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 CIAPIN1Q6FI81 312 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 VPS37DQ86XT2 251 aa20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 TDRD7Q8NHU6 1098 aaKnown RBP20.27■□□□□ 0.84
PACSIN3-210ENST00000533686 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.83
PACSIN3-210ENST00000533686 ZNF609O15014 1411 aa20.27■□□□□ 0.83
PACSIN3-210ENST00000533686 NEFLP07196 543 aa20.26■□□□□ 0.83
PACSIN3-210ENST00000533686 BCAMP50895 628 aa20.26■□□□□ 0.83
PACSIN3-210ENST00000533686 GPC2Q8N158 579 aa20.26■□□□□ 0.83
PACSIN3-210ENST00000533686 XAGE2Q96GT9 111 aa20.26■□□□□ 0.83
PACSIN3-210ENST00000533686 NEUROD6Q96NK8 337 aa20.26■□□□□ 0.83
PACSIN3-210ENST00000533686 RAD17O75943 681 aa20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 GCC1Q96CN9 775 aa20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 KCNQ5Q9NR82 932 aa20.25■□□□□ 0.83
PACSIN3-210ENST00000533686 USP17L3A6NCW0 530 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 USP17L4A6NCW7 530 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 APBB1O00213 710 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 ADORA1P30542 326 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 STRIP1Q5VSL9 837 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 USP17L1Q7RTZ2 530 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 GNL3LQ9NVN8 582 aaKnown RBP20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
PACSIN3-210ENST00000533686 PSMD14O00487 310 aa20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 IGHDP01880 384 aa20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 CCDC102BQ68D86 513 aa20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
PACSIN3-210ENST00000533686 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
PACSIN3-210ENST00000533686 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
PACSIN3-210ENST00000533686 AACSQ86V21 672 aa20.22■□□□□ 0.83
PACSIN3-210ENST00000533686 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
PACSIN3-210ENST00000533686 FAM205AQ6ZU69 1335 aa20.22■□□□□ 0.83
PACSIN3-210ENST00000533686 SEMA3EO15041 775 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 RPS12P25398 132 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 PHKA1P46020 1223 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 GTF2IP78347 998 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 DACT2Q5SW24 774 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 SMC5Q8IY18 1101 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 DBNDD2Q9BQY9 259 aa20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 DBNLQ9UJU6 430 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-210ENST00000533686 ARAP2Q8WZ64 1704 aa20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 FRAT2O75474 233 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 FKBP1AP62942 108 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 RSBN1LQ6PCB5 846 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 DPF2Q92785 391 aa20.2■□□□□ 0.82
PACSIN3-210ENST00000533686 IFIT2P09913 472 aaKnown RBP20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 UQCRFS1P1P0C7P4 283 aa20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 AGBL3Q8NEM8 1001 aa20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 ZNF512BQ96KM6 892 aaPredicted RBP20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
PACSIN3-210ENST00000533686 SCN9AQ15858 1988 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms