RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
COPB1-210ENST00000533533 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
COPB1-210ENST00000533533 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
COPB1-210ENST00000533533 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
COPB1-210ENST00000533533 JARID2Q92833 1246 aaPredicted RBP11.15□□□□□ -0.62
COPB1-210ENST00000533533 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
COPB1-210ENST00000533533 GMLQ99445 158 aa11.15□□□□□ -0.62
COPB1-210ENST00000533533 METTL22Q9BUU2 404 aaPredicted RBP11.15□□□□□ -0.62
COPB1-210ENST00000533533 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 IL16Q14005 1332 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
COPB1-210ENST00000533533 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 FKBP1BP68106 108 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
COPB1-210ENST00000533533 MYOZ2Q9NPC6 264 aa11.14□□□□□ -0.63
COPB1-210ENST00000533533 PITPNM2Q9BZ72 1349 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 POLA2Q14181 598 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 CCDC30Q5VVM6 783 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 CHMP4AQ9BY43 222 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 MYH16Q9H6N6 1097 aa11.13□□□□□ -0.63
COPB1-210ENST00000533533 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
COPB1-210ENST00000533533 WTIPA6NIX2 430 aaPredicted RBP11.12□□□□□ -0.63
COPB1-210ENST00000533533 CTSWP56202 376 aa11.12□□□□□ -0.63
COPB1-210ENST00000533533 TWISTNBQ3B726 338 aaPredicted RBP11.12□□□□□ -0.63
COPB1-210ENST00000533533 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
COPB1-210ENST00000533533 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
COPB1-210ENST00000533533 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
COPB1-210ENST00000533533 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
COPB1-210ENST00000533533 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
COPB1-210ENST00000533533 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
COPB1-210ENST00000533533 IGKV5-2P06315 115 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
COPB1-210ENST00000533533 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
COPB1-210ENST00000533533 TTLL11Q8NHH1 800 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 SCAF8Q9UPN6 1271 aaKnown RBP11.11□□□□□ -0.63
COPB1-210ENST00000533533 MED23Q9ULK4 1368 aa11.11□□□□□ -0.63
COPB1-210ENST00000533533 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
COPB1-210ENST00000533533 SOX10P56693 466 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
COPB1-210ENST00000533533 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 PRAMEF18Q5VWM3 479 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 MOB2Q70IA6 237 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 MXD3Q9BW11 206 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 GREM2Q9H772 168 aa11.1□□□□□ -0.63
COPB1-210ENST00000533533 WNT10BO00744 389 aa11.09□□□□□ -0.63
COPB1-210ENST00000533533 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
COPB1-210ENST00000533533 STRIP1Q5VSL9 837 aa11.09□□□□□ -0.63
COPB1-210ENST00000533533 COA1Q9GZY4 146 aa11.09□□□□□ -0.63
COPB1-210ENST00000533533 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
COPB1-210ENST00000533533 CEP290O15078 2479 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 E9PSI1 815 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 NF2P35240 595 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 MMP14P50281 582 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.64
COPB1-210ENST00000533533 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
COPB1-210ENST00000533533 UBE3BQ7Z3V4 1068 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
COPB1-210ENST00000533533 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 ZNF521Q96K83 1311 aa11.08□□□□□ -0.64
COPB1-210ENST00000533533 H7C1W4 665 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 TBC1D8O95759 1140 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
COPB1-210ENST00000533533 TM4SF4P48230 202 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
COPB1-210ENST00000533533 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 ZNF804BA4D1E1 1349 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 CENPFP49454 3210 aa11.07□□□□□ -0.64
COPB1-210ENST00000533533 SASH1O94885 1247 aa11.06□□□□□ -0.64
COPB1-210ENST00000533533 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
COPB1-210ENST00000533533 NOM1Q5C9Z4 860 aaKnown RBP11.06□□□□□ -0.64
COPB1-210ENST00000533533 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
COPB1-210ENST00000533533 ANKRD2Q9GZV1 360 aa11.06□□□□□ -0.64
COPB1-210ENST00000533533 HTTP42858 3142 aa11.06□□□□□ -0.64
COPB1-210ENST00000533533 MKI67P46013 3256 aaKnown RBP11.06□□□□□ -0.64
COPB1-210ENST00000533533 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 GPR25O00155 361 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 VAMP4O75379 141 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms