RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ATF7IPQ6VMQ6 1270 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 CDC37L1Q7L3B6 337 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 ZNF804AQ7Z570 1209 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 OGFOD1Q8N543 542 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 PGAP2Q9UHJ9 254 aa15.32■□□□□ 0.04
SF3B2-213ENST00000533421 EPHA10Q5JZY3 1008 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 ZKSCAN2Q63HK3 967 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 ARHGAP45Q92619 1136 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SF3B2-213ENST00000533421 DCPSQ96C86 337 aaKnown RBP15.31■□□□□ 0.04
SF3B2-213ENST00000533421 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
SF3B2-213ENST00000533421 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 KIF4BQ2VIQ3 1234 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
SF3B2-213ENST00000533421 MROH5Q6ZUA9 1318 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
SF3B2-213ENST00000533421 TMEM57Q8N5G2 664 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 BICC1Q9H694 974 aaKnown RBP15.3■□□□□ 0.04
SF3B2-213ENST00000533421 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
SF3B2-213ENST00000533421 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
SF3B2-213ENST00000533421 UBTFL1P0CB47 393 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-213ENST00000533421 TBC1D10BQ4KMP7 808 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-213ENST00000533421 SAMD7Q7Z3H4 446 aa15.29■□□□□ 0.04
SF3B2-213ENST00000533421 USP44Q9H0E7 712 aa15.29■□□□□ 0.04
SF3B2-213ENST00000533421 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
SF3B2-213ENST00000533421 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
SF3B2-213ENST00000533421 ECE1P42892 770 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 ZNF280AP59817 542 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-213ENST00000533421 UBE4AQ14139 1066 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 DEFB115Q30KQ5 88 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 RBM26Q5T8P6 1007 aaKnown RBP15.28■□□□□ 0.04
SF3B2-213ENST00000533421 C20orf194Q5TEA3 1177 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 SULF1Q8IWU6 871 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 KAZALD1Q96I82 304 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 ZNF594Q96JF6 807 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-213ENST00000533421 MEIS3Q99687 375 aa15.28■□□□□ 0.04
SF3B2-213ENST00000533421 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
SF3B2-213ENST00000533421 TAF5LO75529 589 aa15.27■□□□□ 0.04
SF3B2-213ENST00000533421 HIRAP54198 1017 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-213ENST00000533421 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.04
SF3B2-213ENST00000533421 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.04
SF3B2-213ENST00000533421 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-213ENST00000533421 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-213ENST00000533421 CD209Q9NNX6 404 aa15.27■□□□□ 0.04
SF3B2-213ENST00000533421 MYOZ2Q9NPC6 264 aa15.27■□□□□ 0.04
SF3B2-213ENST00000533421 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
SF3B2-213ENST00000533421 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
SF3B2-213ENST00000533421 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
SF3B2-213ENST00000533421 COL13A1Q5TAT6 717 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-213ENST00000533421 INTS3Q68E01 1043 aaKnown RBP15.26■□□□□ 0.03
SF3B2-213ENST00000533421 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
SF3B2-213ENST00000533421 GMLQ99445 158 aa15.26■□□□□ 0.03
SF3B2-213ENST00000533421 PITPNM2Q9BZ72 1349 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 TRAF5O00463 557 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 GNAI3P08754 354 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 GTF2IP78347 998 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 CAVIN4Q5BKX8 364 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-213ENST00000533421 TXNRD3Q86VQ6 643 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 VPS37DQ86XT2 251 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 ITPRIPQ8IWB1 547 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
SF3B2-213ENST00000533421 WTIPA6NIX2 430 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-213ENST00000533421 IL1R1P14778 569 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
SF3B2-213ENST00000533421 USP48Q86UV5 1035 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 HHIPL1Q96JK4 782 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 ZNF408Q9H9D4 720 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
SF3B2-213ENST00000533421 TLL2Q9Y6L7 1015 aa15.24■□□□□ 0.03
SF3B2-213ENST00000533421 KLRK1P26718 216 aa15.23■□□□□ 0.03
SF3B2-213ENST00000533421 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
SF3B2-213ENST00000533421 SCARF1Q14162 830 aa15.23■□□□□ 0.03
SF3B2-213ENST00000533421 C2orf69Q8N8R5 385 aa15.23■□□□□ 0.03
SF3B2-213ENST00000533421 COG6Q9Y2V7 657 aa15.23■□□□□ 0.03
SF3B2-213ENST00000533421 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-213ENST00000533421 PDE8BO95263 885 aa15.22■□□□□ 0.03
SF3B2-213ENST00000533421 IFIT1P09914 478 aaKnown RBP15.22■□□□□ 0.03
SF3B2-213ENST00000533421 VEGFBP49765 207 aa15.22■□□□□ 0.03
SF3B2-213ENST00000533421 MAP2K1Q02750 393 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-213ENST00000533421 CST9Q5W186 159 aa15.22■□□□□ 0.03
SF3B2-213ENST00000533421 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
SF3B2-213ENST00000533421 IRS2Q9Y4H2 1338 aa15.21■□□□□ 0.03
SF3B2-213ENST00000533421 MYO1BO43795 1136 aa15.21■□□□□ 0.03
SF3B2-213ENST00000533421 SASH1O94885 1247 aa15.21■□□□□ 0.03
SF3B2-213ENST00000533421 EGFRP00533 1210 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms