RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 TM4SF4P48230 202 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 RALBP1Q15311 655 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 CCDC191Q8NCU4 936 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 GREM2Q9H772 168 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
ATG13-220ENST00000533316 ZNF609O15014 1411 aa13.13□□□□□ -0.31
ATG13-220ENST00000533316 FKTNO75072 461 aa13.13□□□□□ -0.31
ATG13-220ENST00000533316 CTSWP56202 376 aa13.13□□□□□ -0.31
ATG13-220ENST00000533316 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATG13-220ENST00000533316 PKN2Q16513 984 aaKnown RBP13.13□□□□□ -0.31
ATG13-220ENST00000533316 FBXO46Q6PJ61 603 aaPredicted RBP13.13□□□□□ -0.31
ATG13-220ENST00000533316 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
ATG13-220ENST00000533316 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
ATG13-220ENST00000533316 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
ATG13-220ENST00000533316 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
ATG13-220ENST00000533316 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 SNAP23O00161 211 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
ATG13-220ENST00000533316 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
ATG13-220ENST00000533316 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
ATG13-220ENST00000533316 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
ATG13-220ENST00000533316 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
ATG13-220ENST00000533316 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
ATG13-220ENST00000533316 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
ATG13-220ENST00000533316 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
ATG13-220ENST00000533316 MYBBP1AQ9BQG0 1328 aaKnown RBP13.11□□□□□ -0.31
ATG13-220ENST00000533316 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 APAF1O14727 1248 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 NF2P35240 595 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 GTF2IP78347 998 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 TTLL5Q6EMB2 1281 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
ATG13-220ENST00000533316 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
ATG13-220ENST00000533316 TRIM17Q9Y577 477 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 AOX1Q06278 1338 aa13.1□□□□□ -0.31
ATG13-220ENST00000533316 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
ATG13-220ENST00000533316 PI4KAP2A4QPH2 592 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
ATG13-220ENST00000533316 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG13-220ENST00000533316 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
ATG13-220ENST00000533316 CAP1Q01518 475 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 PI4KAP1Q8N8J0 262 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
ATG13-220ENST00000533316 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
ATG13-220ENST00000533316 CLRN2A0PK11 232 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 G2E3Q7L622 706 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 CERS5Q8N5B7 392 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 SLC10A4Q96EP9 437 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 ZBED3Q96IU2 234 aaPredicted RBP13.08□□□□□ -0.32
ATG13-220ENST00000533316 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
ATG13-220ENST00000533316 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 HTTP42858 3142 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 GJA5P36382 358 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
ATG13-220ENST00000533316 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 APOBEC3FQ8IUX4 373 aaKnown RBP13.07□□□□□ -0.32
ATG13-220ENST00000533316 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
ATG13-220ENST00000533316 CD99L2Q8TCZ2 262 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
ATG13-220ENST00000533316 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
ATG13-220ENST00000533316 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 TAF5LO75529 589 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
ATG13-220ENST00000533316 EN2P19622 333 aaPredicted RBP13.06□□□□□ -0.32
ATG13-220ENST00000533316 ITGA6P23229 1130 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
ATG13-220ENST00000533316 GNAI1P63096 354 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
ATG13-220ENST00000533316 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 WNK4Q96J92 1243 aa13.06□□□□□ -0.32
ATG13-220ENST00000533316 CENPFP49454 3210 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 H7C1W4 665 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 CHRNDQ07001 517 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 DLGAP5Q15398 846 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
ATG13-220ENST00000533316 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 CD209Q9NNX6 404 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 MYH3P11055 1940 aa13.05□□□□□ -0.32
ATG13-220ENST00000533316 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
ATG13-220ENST00000533316 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
ATG13-220ENST00000533316 KCNJ4P48050 445 aa13.04□□□□□ -0.32
ATG13-220ENST00000533316 CRHR2Q13324 411 aa13.04□□□□□ -0.32
ATG13-220ENST00000533316 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms