RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 ARID4AP29374 1257 aaPredicted RBP19.42■□□□□ 0.7
TRIM3-213ENST00000533309 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
TRIM3-213ENST00000533309 TMC4Q7Z404 712 aa19.42■□□□□ 0.7
TRIM3-213ENST00000533309 XDHP47989 1333 aa19.42■□□□□ 0.7
TRIM3-213ENST00000533309 DUOX1Q9NRD9 1551 aa19.42■□□□□ 0.7
TRIM3-213ENST00000533309 CHMLP26374 656 aa19.41■□□□□ 0.7
TRIM3-213ENST00000533309 KLRK1P26718 216 aa19.41■□□□□ 0.7
TRIM3-213ENST00000533309 MCAMP43121 646 aa19.41■□□□□ 0.7
TRIM3-213ENST00000533309 GPSM2P81274 684 aa19.41■□□□□ 0.7
TRIM3-213ENST00000533309 DNAJC2Q99543 621 aaKnown RBP19.41■□□□□ 0.7
TRIM3-213ENST00000533309 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
TRIM3-213ENST00000533309 DOCK2Q92608 1830 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 BCAMP50895 628 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 PI16Q6UXB8 463 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 SP8Q8IXZ3 490 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 BRCA1P38398 1863 aaKnown RBP19.4■□□□□ 0.7
TRIM3-213ENST00000533309 POLD1P28340 1107 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 KCNJ4P48050 445 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 ZNF622Q969S3 477 aaKnown RBP eCLIP19.4■□□□□ 0.7
TRIM3-213ENST00000533309 PAG1Q9NWQ8 432 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 PODXL2Q9NZ53 605 aa19.4■□□□□ 0.7
TRIM3-213ENST00000533309 UQCRFS1P1P0C7P4 283 aa19.39■□□□□ 0.69
TRIM3-213ENST00000533309 GYG1P46976 350 aa19.39■□□□□ 0.69
TRIM3-213ENST00000533309 SNRKQ9NRH2 765 aa19.39■□□□□ 0.69
TRIM3-213ENST00000533309 LEMD3Q9Y2U8 911 aa19.39■□□□□ 0.69
TRIM3-213ENST00000533309 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
TRIM3-213ENST00000533309 GOLIM4O00461 696 aa19.38■□□□□ 0.69
TRIM3-213ENST00000533309 PTGER2P43116 358 aa19.38■□□□□ 0.69
TRIM3-213ENST00000533309 RASGRF1Q13972 1273 aa19.38■□□□□ 0.69
TRIM3-213ENST00000533309 PRPF40BQ6NWY9 871 aaKnown RBP19.38■□□□□ 0.69
TRIM3-213ENST00000533309 OLFM4Q6UX06 510 aa19.38■□□□□ 0.69
TRIM3-213ENST00000533309 TXNRD3Q86VQ6 643 aa19.38■□□□□ 0.69
TRIM3-213ENST00000533309 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
TRIM3-213ENST00000533309 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
TRIM3-213ENST00000533309 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
TRIM3-213ENST00000533309 RFX7Q2KHR2 1363 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 ZAP70P43403 619 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 FBXO33Q7Z6M2 555 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 ANTXR1Q9H6X2 564 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 HMG20BQ9P0W2 317 aa19.37■□□□□ 0.69
TRIM3-213ENST00000533309 MFAP1P55081 439 aaKnown RBP19.36■□□□□ 0.69
TRIM3-213ENST00000533309 C15orf52Q6ZUT6 534 aaKnown RBP19.36■□□□□ 0.69
TRIM3-213ENST00000533309 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 CNKSR1Q969H4 720 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 IL25Q9H293 177 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
TRIM3-213ENST00000533309 UFL1O94874 794 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 KCNA3P22001 575 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 ATP2B4P23634 1241 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM3-213ENST00000533309 ESYT1Q9BSJ8 1104 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 POLLQ9UGP5 575 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 GGA1Q9UJY5 639 aa19.36■□□□□ 0.69
TRIM3-213ENST00000533309 SNED1Q8TER0 1413 aa19.35■□□□□ 0.69
TRIM3-213ENST00000533309 CYP2E1P05181 493 aaPredicted RBP19.35■□□□□ 0.69
TRIM3-213ENST00000533309 CAVIN4Q5BKX8 364 aa19.35■□□□□ 0.69
TRIM3-213ENST00000533309 TBC1D16Q8TBP0 767 aa19.35■□□□□ 0.69
TRIM3-213ENST00000533309 GPR101Q96P66 508 aaPredicted RBP19.35■□□□□ 0.69
TRIM3-213ENST00000533309 A0A0G2JLW4 131 aa19.34■□□□□ 0.69
TRIM3-213ENST00000533309 DPEP1P16444 411 aa19.34■□□□□ 0.69
TRIM3-213ENST00000533309 SPATA5Q8NB90 893 aa19.34■□□□□ 0.69
TRIM3-213ENST00000533309 C7orf43Q8WVR3 580 aa19.34■□□□□ 0.69
TRIM3-213ENST00000533309 CHGBP05060 677 aa19.33■□□□□ 0.69
TRIM3-213ENST00000533309 DIAPH3Q9NSV4 1193 aa19.33■□□□□ 0.69
TRIM3-213ENST00000533309 IQSEC3Q9UPP2 1182 aaPredicted RBP19.33■□□□□ 0.69
TRIM3-213ENST00000533309 CHD4Q14839 1912 aa19.33■□□□□ 0.69
TRIM3-213ENST00000533309 MED23Q9ULK4 1368 aa19.33■□□□□ 0.69
TRIM3-213ENST00000533309 HIP1O00291 1037 aa19.33■□□□□ 0.68
TRIM3-213ENST00000533309 ZBTB22O15209 634 aa19.33■□□□□ 0.68
TRIM3-213ENST00000533309 HIBADHP31937 336 aaKnown RBP19.33■□□□□ 0.68
TRIM3-213ENST00000533309 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.68
TRIM3-213ENST00000533309 CWC27Q6UX04 472 aaKnown RBP19.33■□□□□ 0.68
TRIM3-213ENST00000533309 A0A0D9SFI3 127 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 SGSM2O43147 1006 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 TGFB2P61812 414 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 TICAM2Q86XR7 235 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 MPNDQ8N594 471 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 FAM227BQ96M60 508 aa19.32■□□□□ 0.68
TRIM3-213ENST00000533309 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
TRIM3-213ENST00000533309 GNL3LQ9NVN8 582 aaKnown RBP19.32■□□□□ 0.68
TRIM3-213ENST00000533309 SEMA3EO15041 775 aa19.3■□□□□ 0.68
TRIM3-213ENST00000533309 DPP8Q6V1X1 898 aaPredicted RBP19.3■□□□□ 0.68
TRIM3-213ENST00000533309 TTLL6Q8N841 843 aa19.3■□□□□ 0.68
TRIM3-213ENST00000533309 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
TRIM3-213ENST00000533309 PDS5AQ29RF7 1337 aaKnown RBP19.3■□□□□ 0.68
TRIM3-213ENST00000533309 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 TTF1Q15361 905 aaPredicted RBP19.29■□□□□ 0.68
TRIM3-213ENST00000533309 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
TRIM3-213ENST00000533309 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 RAD50Q92878 1312 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 EIF5BO60841 1220 aaKnown RBP19.29■□□□□ 0.68
TRIM3-213ENST00000533309 REC8O95072 547 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 ZNF804AQ7Z570 1209 aa19.29■□□□□ 0.68
TRIM3-213ENST00000533309 ZNF219Q9P2Y4 722 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms