RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 PUS7LQ9H0K6 701 aaKnown RBP18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 RIC1Q4ADV7 1423 aa18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 CCT2P78371 535 aaKnown RBP18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 LEO1Q8WVC0 666 aaPredicted RBP18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 PPFIA3O75145 1194 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 WASHC4Q2M389 1173 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 METTL24Q5JXM2 366 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 SPATA32Q96LK8 384 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 SCAND2PQ9GZW5 306 aaPredicted RBP18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
CACNA1E-208ENST00000533229 EXOC5O00471 708 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 IRS4O14654 1257 aaPredicted RBP18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 MCAMP43121 646 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 CTSWP56202 376 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 ZKSCAN5Q9Y2L8 839 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 HAND2P61296 217 aa18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 LLPHQ9BRT6 129 aaKnown RBP18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
CACNA1E-208ENST00000533229 FGAP02671 866 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 PDIA3P30101 505 aaKnown RBP18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 CAMK4Q16566 473 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 VGLL2Q8N8G2 317 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 H3BQV1 296 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 CCDC39Q9UFE4 941 aa18.1■□□□□ 0.49
CACNA1E-208ENST00000533229 ANKRD18BA2A2Z9 1011 aa18.09■□□□□ 0.49
CACNA1E-208ENST00000533229 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
CACNA1E-208ENST00000533229 FOSBP53539 338 aa18.09■□□□□ 0.49
CACNA1E-208ENST00000533229 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
CACNA1E-208ENST00000533229 ZNF500O60304 480 aaPredicted RBP18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 ADD1P35611 737 aaKnown RBP18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 DZIP3Q86Y13 1208 aaKnown RBP18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 MPNDQ8N594 471 aa18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 APPBP2Q92624 585 aa18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 SALL1Q9NSC2 1324 aa18.08■□□□□ 0.49
CACNA1E-208ENST00000533229 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 AP5Z1O43299 807 aa18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 LRRFIP1Q32MZ4 808 aaKnown RBP18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 ITGB4P16144 1822 aa18.08■□□□□ 0.48
CACNA1E-208ENST00000533229 LRP6O75581 1613 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 ADCY5O95622 1261 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 GPAA1O43292 621 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 KDM4AO75164 1064 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 ZNF34Q8IZ26 560 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 FTOQ9C0B1 505 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 ZSCAN16Q9H4T2 348 aaPredicted RBP18.07■□□□□ 0.48
CACNA1E-208ENST00000533229 GOLGA6L4A6NEF3 574 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 PDE8AO60658 829 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 NR1I2O75469 434 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 OFD1O75665 1012 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 PDE8BO95263 885 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
CACNA1E-208ENST00000533229 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 EVCP57679 992 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 MAP3K11Q16584 847 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 CKAP2LQ8IYA6 745 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 PHKA1P46020 1223 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 UBE2Q2Q8WVN8 375 aa18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
CACNA1E-208ENST00000533229 SLIT2O94813 1529 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 MCM5P33992 734 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 ADD2P35612 726 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 ANTXR2P58335 489 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 NKX2-3Q8TAU0 364 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 ZNF512BQ96KM6 892 aaPredicted RBP18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 DENND2AQ9ULE3 1009 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 SNAP23O00161 211 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms