RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 NFE2L2Q16236 605 aa14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 APOBEC3FQ8IUX4 373 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 MKI67P46013 3256 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-213ENST00000533149 PRKG1Q13976 671 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 ARHGEF6Q15052 776 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 PLBD2Q8NHP8 589 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 ZNF428Q96B54 188 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 ZNF333Q96JL9 665 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 BABAM1Q9NWV8 329 aa14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-213ENST00000533149 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 DLG5Q8TDM6 1919 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 PSME4Q14997 1843 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 SP3Q02447 781 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 SLC4A8Q2Y0W8 1093 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 ISCA1Q9BUE6 129 aa14.59□□□□□ -0.07
TRAPPC4-213ENST00000533149 UNCXA6NJT0 531 aa14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 IGF2BP3O00425 579 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 CRHR2Q13324 411 aa14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 SLC9C1Q4G0N8 1177 aa14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 PNNQ9H307 717 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-213ENST00000533149 XDHP47989 1333 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 COL4A1P02462 1669 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 ATP2B4P23634 1241 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 RTL5Q5HYW3 569 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 PLEKHF1Q96S99 279 aa14.57□□□□□ -0.08
TRAPPC4-213ENST00000533149 ATP5J2-PTCD1G3V325 749 aa14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 CENPBP07199 599 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 TRIM28Q13263 835 aaKnown RBP14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 DACT2Q5SW24 774 aa14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 SEC31BQ9NQW1 1179 aa14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 MAPK8IP3Q9UPT6 1336 aa14.56□□□□□ -0.08
TRAPPC4-213ENST00000533149 SASH1O94885 1247 aa14.55□□□□□ -0.08
TRAPPC4-213ENST00000533149 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
TRAPPC4-213ENST00000533149 STRIP1Q5VSL9 837 aa14.55□□□□□ -0.08
TRAPPC4-213ENST00000533149 RBM27Q9P2N5 1060 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-213ENST00000533149 COL1A1P02452 1464 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC4-213ENST00000533149 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
TRAPPC4-213ENST00000533149 ZBTB38Q8NAP3 1195 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-213ENST00000533149 FBXW7Q969H0 707 aa14.54□□□□□ -0.08
TRAPPC4-213ENST00000533149 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
TRAPPC4-213ENST00000533149 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-213ENST00000533149 HTTP42858 3142 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 ANKRD18AQ8IVF6 992 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 DPF3Q92784 378 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 CLMNQ96JQ2 1002 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 MXD3Q9BW11 206 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 CHPF2Q9P2E5 772 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 PPP2R3BQ9Y5P8 575 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
TRAPPC4-213ENST00000533149 TRIOBPQ9H2D6 2365 aa14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 TESPA1A2RU30 521 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 APAF1O14727 1248 aa14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 SUPT20HL1Q3ZLR7 823 aa14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 COA1Q9GZY4 146 aa14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 DBF4Q9UBU7 674 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 FZD1Q9UP38 647 aa14.52□□□□□ -0.08
TRAPPC4-213ENST00000533149 LAMB1P07942 1786 aa14.52□□□□□ -0.09
TRAPPC4-213ENST00000533149 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
TRAPPC4-213ENST00000533149 ZBED3Q96IU2 234 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC4-213ENST00000533149 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
TRAPPC4-213ENST00000533149 PDE8AO60658 829 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 CAP1Q01518 475 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 KIAA0825Q8IV33 1275 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 PTPN18Q99952 460 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 ZFYVE28Q9HCC9 887 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
TRAPPC4-213ENST00000533149 MYCP01106 439 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 RIPK4P57078 832 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 DLGAP5Q15398 846 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 TTLL5Q6EMB2 1281 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 ANKRD13AQ8IZ07 590 aa14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
TRAPPC4-213ENST00000533149 A0A1W2PPC1 479 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 WTIPA6NIX2 430 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 MYO1BO43795 1136 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 WDHD1O75717 1129 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 GNRH1P01148 92 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 HOXB7P09629 217 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 NR2E3Q9Y5X4 410 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 CENPFP49454 3210 aa14.48□□□□□ -0.09
TRAPPC4-213ENST00000533149 PCCAP05165 728 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms