RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 CASQ1P31415 396 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 IL15P40933 162 aaPredicted RBP10.88□□□□□ -0.67
BDNF-216ENST00000532997 SYKP43405 635 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 UBASH3AP57075 661 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 FKBP4Q02790 459 aaKnown RBP eCLIP10.88□□□□□ -0.67
BDNF-216ENST00000532997 ELF2Q15723 593 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 ZNF274Q96GC6 653 aaPredicted RBP10.88□□□□□ -0.67
BDNF-216ENST00000532997 A0A1W2PQ27 194 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 A0A1W2PQ64 194 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 A0A1W2PQD8 194 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 SASH1O94885 1247 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 CABP4P57796 275 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 SYT10Q6XYQ8 523 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 NCOA7Q8NI08 942 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
BDNF-216ENST00000532997 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
BDNF-216ENST00000532997 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 MYO1BO43795 1136 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 HSP90B2PQ58FF3 399 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 LRRC59Q96AG4 307 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 TOMM22Q9NS69 142 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 DNAI1Q9UI46 699 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 ZNF330Q9Y3S2 320 aaPredicted RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 ERICH2A1L162 156 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 POLR3DP05423 398 aaPredicted RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 NLRP12P59046 1061 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 RBM43Q6ZSC3 357 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 PGBD1Q96JS3 809 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 KLF18A0A0U1RQI7 1052 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 ZNF213O14771 459 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 RNF113AO15541 343 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 IGSF3O75054 1194 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 SLFNL1Q499Z3 407 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 ARHGAP29Q52LW3 1261 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 PPFIBP1Q86W92 1011 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
BDNF-216ENST00000532997 JARID2Q92833 1246 aaPredicted RBP10.87□□□□□ -0.67
BDNF-216ENST00000532997 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 RBM6P78332 1123 aaKnown RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 ZNF589Q86UQ0 364 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 HAUS7Q99871 368 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 KIAA1468Q9P260 1216 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 XBP1P17861 261 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 PIP4K2AP48426 406 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 SCRN1Q12765 414 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 POTEB2H3BUK9 544 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 LMBR1LQ6UX01 489 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 FAM177A1Q8N128 213 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 TXLNBQ8N3L3 684 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 CNNM3Q8NE01 707 aa10.86□□□□□ -0.67
BDNF-216ENST00000532997 CWC25Q9NXE8 425 aaPredicted RBP10.86□□□□□ -0.67
BDNF-216ENST00000532997 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
BDNF-216ENST00000532997 MYL5Q02045 173 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 TLR7Q9NYK1 1049 aaKnown RBP10.85□□□□□ -0.67
BDNF-216ENST00000532997 RTEL1Q9NZ71 1219 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 CEMIPQ8WUJ3 1361 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 CEBPAP49715 358 aaPredicted RBP10.85□□□□□ -0.67
BDNF-216ENST00000532997 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 ADAMTS13Q76LX8 1427 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 CYP21A2P08686 494 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 KCNA6P17658 529 aa10.85□□□□□ -0.67
BDNF-216ENST00000532997 XPO4Q9C0E2 1151 aaKnown RBP10.85□□□□□ -0.67
BDNF-216ENST00000532997 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.85□□□□□ -0.67
BDNF-216ENST00000532997 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
BDNF-216ENST00000532997 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 AP5Z1O43299 807 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 PRC1O43663 620 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 FANCCQ00597 558 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
BDNF-216ENST00000532997 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms