RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	ZC3H15	Q8WU90	426 aa	Known RBP	12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CAPNS2	Q96L46	248 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	WBP1L	Q9NX94	342 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CWC25	Q9NXE8	425 aa	Predicted RBP	12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	ANKIB1	Q9P2G1	1089 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	THSD7B	Q9C0I4	1608 aa		12.39	□□□□□ -0.43
PPFIA1-223	ENST00000532793	ECE2	O60344	883 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PDE8A	O60658	829 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	LBX1	P52954	281 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	GPSM2	P81274	684 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	TLL2	Q9Y6L7	1015 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CACNA1F	O60840	1977 aa		12.38	□□□□□ -0.43
PPFIA1-223	ENST00000532793	YDJC	A8MPS7	323 aa		12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	UFL1	O94874	794 aa		12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PCCA	P05165	728 aa	Predicted RBP	12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	RPS12	P25398	132 aa	Known RBP	12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	FMR1	Q06787	632 aa	Known RBP eCLIP	12.37	□□□□□ -0.43	1e-8	■■■■□ 22.3
PPFIA1-223	ENST00000532793	CYP4F22	Q6NT55	531 aa		12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	DPF2	Q92785	391 aa		12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	GPR101	Q96P66	508 aa	Predicted RBP	12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	GGA1	Q9UJY5	639 aa		12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	POLR2A	P24928	1970 aa	Known RBP	12.37	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PSMD14	O00487	310 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	ANKRD18A	Q8IVF6	992 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	C8orf58	Q8NAV2	365 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	TBC1D16	Q8TBP0	767 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	DCPS	Q96C86	337 aa	Known RBP	12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CDC5L	Q99459	802 aa	Known RBP	12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	METTL22	Q9BUU2	404 aa	Predicted RBP	12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	POLL	Q9UGP5	575 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	MAP3K2	Q9Y2U5	619 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PSME4	Q14997	1843 aa		12.36	□□□□□ -0.43
PPFIA1-223	ENST00000532793	MAP2K2	P36507	400 aa		12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	RBM26	Q5T8P6	1007 aa	Known RBP	12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CST9	Q5W186	159 aa		12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	TRPM4	Q8TD43	1214 aa		12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	SEC31B	Q9NQW1	1179 aa		12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PGAP2	Q9UHJ9	254 aa		12.35	□□□□□ -0.43
PPFIA1-223	ENST00000532793	HSPA8	P11142	646 aa	Known RBP	12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	GPR153	Q6NV75	609 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	KSR2	Q6VAB6	950 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	SAMD7	Q7Z3H4	446 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	SAPCD2	Q86UD0	394 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	HHIPL1	Q96JK4	782 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PODXL2	Q9NZ53	605 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	PLA2G2E	Q9NZK7	142 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	COL4A1	P02462	1669 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	SCN9A	Q15858	1988 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	XDH	P47989	1333 aa		12.34	□□□□□ -0.43
PPFIA1-223	ENST00000532793	HIRA	P54198	1017 aa	Predicted RBP	12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	KIF4B	Q2VIQ3	1234 aa		12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	TWISTNB	Q3B726	338 aa	Predicted RBP	12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	KRT26	Q7Z3Y9	468 aa		12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	USP48	Q86UV5	1035 aa		12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	SULF1	Q8IWU6	871 aa		12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	JARID2	Q92833	1246 aa	Predicted RBP	12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	TSR2	Q969E8	191 aa	Known RBP	12.33	□□□□□ -0.44
PPFIA1-223	ENST00000532793	SHTN1	A0MZ66	631 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	PI4KAP2	A4QPH2	592 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	ANP32C	O43423	234 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	CA12	O43570	354 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	ATP2B4	P23634	1241 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	CTSW	P56202	376 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	CCDC27	Q2M243	656 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	TSPYL6	Q8N831	410 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	PI4KAP1	Q8N8J0	262 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	C2orf69	Q8N8R5	385 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	MRS2	Q9HD23	443 aa		12.32	□□□□□ -0.44
PPFIA1-223	ENST00000532793	AKAP11	Q9UKA4	1901 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	AOC2	O75106	756 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	ZEB1	P37275	1124 aa	Predicted RBP	12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	IGHMBP2	P38935	993 aa	Known RBP	12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	HUNK	P57058	714 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	WWC1	Q8IX03	1113 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	AGBL3	Q8NEM8	1001 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	MYH16	Q9H6N6	1097 aa		12.31	□□□□□ -0.44
PPFIA1-223	ENST00000532793	RTL9	Q8NET4	1388 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	VIL1	P09327	827 aa	Known RBP	12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	BRPF1	P55201	1214 aa	Predicted RBP	12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	NOG	Q13253	232 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	FKBP5	Q13451	457 aa	Predicted RBP	12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	TMEM92	Q6UXU6	159 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	UBE3B	Q7Z3V4	1068 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	FBXW7	Q969H0	707 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	GBA2	Q9HCG7	927 aa	Predicted RBP	12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	KCNQ5	Q9NR82	932 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	GGA3	Q9NZ52	723 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	IL16	Q14005	1332 aa		12.3	□□□□□ -0.44
PPFIA1-223	ENST00000532793	NEURL1B	A8MQ27	555 aa		12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	CWF19L2	Q2TBE0	894 aa	Known RBP	12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	PODN	Q7Z5L7	613 aa		12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	MPHOSPH8	Q99549	860 aa		12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	BSDC1	Q9NW68	430 aa	Predicted RBP	12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	MED23	Q9ULK4	1368 aa		12.29	□□□□□ -0.44
PPFIA1-223	ENST00000532793	USP17L3	A6NCW0	530 aa		12.28	□□□□□ -0.44

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