RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 FSTL1Q12841 308 aa30.83■■■□□ 2.53
USP48-214ENST00000532737 YDJCA8MPS7 323 aa30.82■■■□□ 2.52
USP48-214ENST00000532737 EIF6P56537 245 aaKnown RBP30.82■■■□□ 2.52
USP48-214ENST00000532737 UBE4AQ14139 1066 aa30.82■■■□□ 2.52
USP48-214ENST00000532737 SIRT2Q8IXJ6 389 aa30.82■■■□□ 2.52
USP48-214ENST00000532737 RPAP2Q8IXW5 612 aaPredicted RBP30.82■■■□□ 2.52
USP48-214ENST00000532737 A0A1B0GUL6 1792 aa30.82■■■□□ 2.52
USP48-214ENST00000532737 ECE2O60344 883 aa30.81■■■□□ 2.52
USP48-214ENST00000532737 DDNO94850 711 aaPredicted RBP30.81■■■□□ 2.52
USP48-214ENST00000532737 DPY19L2Q6NUT2 758 aa30.81■■■□□ 2.52
USP48-214ENST00000532737 C15orf52Q6ZUT6 534 aaKnown RBP30.81■■■□□ 2.52
USP48-214ENST00000532737 CXCL9Q07325 125 aa30.8■■■□□ 2.52
USP48-214ENST00000532737 CEP126Q9P2H0 1117 aa30.8■■■□□ 2.52
USP48-214ENST00000532737 G3V3G9 751 aa30.79■■■□□ 2.52
USP48-214ENST00000532737 DCAF8Q5TAQ9 597 aa30.79■■■□□ 2.52
USP48-214ENST00000532737 KCNQ5Q9NR82 932 aa30.79■■■□□ 2.52
USP48-214ENST00000532737 FGFR2P21802 821 aa30.78■■■□□ 2.52
USP48-214ENST00000532737 G3BP1Q13283 466 aaKnown RBP eCLIP30.78■■■□□ 2.52
USP48-214ENST00000532737 SURF6O75683 361 aaKnown RBP30.77■■■□□ 2.52
USP48-214ENST00000532737 RAD17O75943 681 aa30.77■■■□□ 2.52
USP48-214ENST00000532737 NOP58Q9Y2X3 529 aaKnown RBP30.77■■■□□ 2.52
USP48-214ENST00000532737 TFCP2Q12800 502 aa30.76■■■□□ 2.51
USP48-214ENST00000532737 PUM3Q15397 648 aaKnown RBP30.76■■■□□ 2.51
USP48-214ENST00000532737 COA1Q9GZY4 146 aa30.76■■■□□ 2.51
USP48-214ENST00000532737 GJA3Q9Y6H8 435 aa30.76■■■□□ 2.51
USP48-214ENST00000532737 HTRA3P83110 453 aa30.75■■■□□ 2.51
USP48-214ENST00000532737 CIAPIN1Q6FI81 312 aa30.75■■■□□ 2.51
USP48-214ENST00000532737 GPC2Q8N158 579 aa30.75■■■□□ 2.51
USP48-214ENST00000532737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.75■■■□□ 2.51
USP48-214ENST00000532737 SASH1O94885 1247 aa30.74■■■□□ 2.51
USP48-214ENST00000532737 PODNQ7Z5L7 613 aa30.74■■■□□ 2.51
USP48-214ENST00000532737 HMMRO75330 724 aa30.73■■■□□ 2.51
USP48-214ENST00000532737 GYG1P46976 350 aa30.73■■■□□ 2.51
USP48-214ENST00000532737 ATP2B3Q16720 1220 aa30.73■■■□□ 2.51
USP48-214ENST00000532737 FAM84BQ96KN1 310 aaPredicted RBP30.73■■■□□ 2.51
USP48-214ENST00000532737 CD209Q9NNX6 404 aa30.73■■■□□ 2.51
USP48-214ENST00000532737 OS9Q13438 667 aaPredicted RBP30.72■■■□□ 2.51
USP48-214ENST00000532737 TNIP1Q15025 636 aa30.72■■■□□ 2.51
USP48-214ENST00000532737 SMC1BQ8NDV3 1235 aa30.72■■■□□ 2.51
USP48-214ENST00000532737 LPIN2Q92539 896 aa30.72■■■□□ 2.51
USP48-214ENST00000532737 PCDHB15Q9Y5E8 787 aa30.72■■■□□ 2.51
USP48-214ENST00000532737 PSMD14O00487 310 aa30.71■■■□□ 2.51
USP48-214ENST00000532737 IFIT1P09914 478 aaKnown RBP30.71■■■□□ 2.51
USP48-214ENST00000532737 VEGFAP15692 232 aaPredicted RBP30.71■■■□□ 2.51
USP48-214ENST00000532737 ZNF804AQ7Z570 1209 aa30.71■■■□□ 2.51
USP48-214ENST00000532737 EXOC6BQ9Y2D4 811 aa30.71■■■□□ 2.51
USP48-214ENST00000532737 POTECB2RU33 542 aa30.7■■■□□ 2.51
USP48-214ENST00000532737 SLC5A1P13866 664 aa30.7■■■□□ 2.51
USP48-214ENST00000532737 HIBADHP31937 336 aaKnown RBP30.7■■■□□ 2.51
USP48-214ENST00000532737 FBXO33Q7Z6M2 555 aa30.7■■■□□ 2.51
USP48-214ENST00000532737 EXOC6Q8TAG9 804 aa30.7■■■□□ 2.51
USP48-214ENST00000532737 L3MBTL3Q96JM7 780 aaPredicted RBP30.7■■■□□ 2.51
USP48-214ENST00000532737 KLRG1Q96E93 195 aa30.69■■■□□ 2.5
USP48-214ENST00000532737 IL1R1P14778 569 aa30.68■■■□□ 2.5
USP48-214ENST00000532737 TIMM10P62072 90 aa30.68■■■□□ 2.5
USP48-214ENST00000532737 SCN9AQ15858 1988 aa30.68■■■□□ 2.5
USP48-214ENST00000532737 USP17L3A6NCW0 530 aa30.67■■■□□ 2.5
USP48-214ENST00000532737 USP17L4A6NCW7 530 aa30.67■■■□□ 2.5
USP48-214ENST00000532737 VIL1P09327 827 aaKnown RBP30.67■■■□□ 2.5
USP48-214ENST00000532737 BCAMP50895 628 aa30.67■■■□□ 2.5
USP48-214ENST00000532737 IRX6P78412 446 aaPredicted RBP30.67■■■□□ 2.5
USP48-214ENST00000532737 USP17L1Q7RTZ2 530 aa30.67■■■□□ 2.5
USP48-214ENST00000532737 AKAP2Q9Y2D5 859 aa30.67■■■□□ 2.5
USP48-214ENST00000532737 ZBTB12Q9Y330 459 aaPredicted RBP30.67■■■□□ 2.5
USP48-214ENST00000532737 GMPSP49915 693 aaPredicted RBP30.66■■■□□ 2.5
USP48-214ENST00000532737 CAVIN4Q5BKX8 364 aa30.66■■■□□ 2.5
USP48-214ENST00000532737 A0A1B0GUL7 405 aa30.65■■■□□ 2.5
USP48-214ENST00000532737 ADORA1P30542 326 aa30.65■■■□□ 2.5
USP48-214ENST00000532737 SCNN1DP51172 638 aa30.65■■■□□ 2.5
USP48-214ENST00000532737 JMYQ8N9B5 988 aa30.65■■■□□ 2.5
USP48-214ENST00000532737 TDRD7Q8NHU6 1098 aaKnown RBP30.65■■■□□ 2.5
USP48-214ENST00000532737 GTF2IP78347 998 aa30.64■■■□□ 2.5
USP48-214ENST00000532737 VPS37DQ86XT2 251 aa30.64■■■□□ 2.5
USP48-214ENST00000532737 HSP90AB4PQ58FF6 505 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 DACT2Q5SW24 774 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 STRIP1Q5VSL9 837 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 TTLL5Q6EMB2 1281 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 FBXW7Q969H0 707 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 GPR108Q9NPR9 543 aa30.63■■■□□ 2.49
USP48-214ENST00000532737 AAMPQ13685 434 aa30.62■■■□□ 2.49
USP48-214ENST00000532737 RSBN1LQ6PCB5 846 aaPredicted RBP30.62■■■□□ 2.49
USP48-214ENST00000532737 ERC1Q8IUD2 1116 aa30.62■■■□□ 2.49
USP48-214ENST00000532737 NEUROD6Q96NK8 337 aa30.62■■■□□ 2.49
USP48-214ENST00000532737 MXD3Q9BW11 206 aa30.62■■■□□ 2.49
USP48-214ENST00000532737 IQSEC3Q9UPP2 1182 aaPredicted RBP30.62■■■□□ 2.49
USP48-214ENST00000532737 TNNI3KQ59H18 835 aa30.61■■■□□ 2.49
USP48-214ENST00000532737 XAGE2Q96GT9 111 aa30.61■■■□□ 2.49
USP48-214ENST00000532737 HACL1Q9UJ83 578 aa30.61■■■□□ 2.49
USP48-214ENST00000532737 FPGT-TNNI3KV9GXZ4 949 aa30.61■■■□□ 2.49
USP48-214ENST00000532737 APBB1O00213 710 aa30.6■■■□□ 2.49
USP48-214ENST00000532737 ZNF609O15014 1411 aa30.6■■■□□ 2.49
USP48-214ENST00000532737 EPS15P42566 896 aa30.6■■■□□ 2.49
USP48-214ENST00000532737 GPRC5DQ9NZD1 345 aa30.6■■■□□ 2.49
USP48-214ENST00000532737 JAG2Q9Y219 1238 aa30.6■■■□□ 2.49
USP48-214ENST00000532737 PCNTO95613 3336 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 IQCA1LA6NCM1 817 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 RPS12P25398 132 aaKnown RBP30.59■■■□□ 2.49
USP48-214ENST00000532737 PHKA1P46020 1223 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 RHPN1Q8TCX5 695 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 DPF2Q92785 391 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms