RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 B4E1Z4 1266 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 MCAMP43121 646 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 ME1P48163 572 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 SCRN1Q12765 414 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 E7EWF7 191 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 GPAA1O43292 621 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 TSC1Q92574 1164 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 HAUS7Q99871 368 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
PPFIA1-219ENST00000531657 PTPDC1A2A3K4 754 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 FGAP02671 866 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 SDR42E1Q8WUS8 393 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 PIH1D3Q9NQM4 214 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 RNF113AO15541 343 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 CASP7P55210 303 aa11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.67e-6■■■□□ 15.7
PPFIA1-219ENST00000531657 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-219ENST00000531657 HIP1O00291 1037 aa11.27□□□□□ -0.6
PPFIA1-219ENST00000531657 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.6
PPFIA1-219ENST00000531657 ITPK1Q13572 414 aa11.27□□□□□ -0.6
PPFIA1-219ENST00000531657 MEX3CQ5U5Q3 659 aaKnown RBP11.27□□□□□ -0.6
PPFIA1-219ENST00000531657 KRT85P78386 507 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 ZNF213O14771 459 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 PRC1O43663 620 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 CYP19A1P11511 503 aaPredicted RBP11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 TDO2P48775 406 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 EVX2Q03828 476 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
PPFIA1-219ENST00000531657 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 LOC102724428A0A0B4J2F2 783 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 MBD4O95243 580 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 CTSWP56202 376 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 SIK1P57059 783 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 AOX1Q06278 1338 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 RAD21O60216 631 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 TRDNQ13061 729 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 CREBRFQ8IUR6 639 aa11.26□□□□□ -0.61
PPFIA1-219ENST00000531657 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 NR1I2O75469 434 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 MBD3O95983 291 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 IMMTQ16891 758 aaKnown RBP11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 TNMDQ9H2S6 317 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 A0A1B0GVL5 298 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 GNPATO15228 680 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 ADCY5O95622 1261 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 KLRK1P26718 216 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 DNAJC25Q9H1X3 360 aa11.25□□□□□ -0.61
PPFIA1-219ENST00000531657 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
PPFIA1-219ENST00000531657 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
PPFIA1-219ENST00000531657 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
PPFIA1-219ENST00000531657 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
PPFIA1-219ENST00000531657 ATP6V1DQ9Y5K8 247 aa11.24□□□□□ -0.61
PPFIA1-219ENST00000531657 DHX32Q7L7V1 743 aaKnown RBP11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 ZSCAN31Q96LW9 406 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 NAPBQ9H115 298 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 COL5A2P05997 1499 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 USPL1Q5W0Q7 1092 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 PDILTQ8N807 584 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 NUP62CLQ9H1M0 184 aa11.23□□□□□ -0.61
PPFIA1-219ENST00000531657 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 CCDC173Q0VFZ6 552 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 AKAP2Q9Y2D5 859 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 NCAPD2Q15021 1401 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 UTYO14607 1347 aa11.22□□□□□ -0.61
PPFIA1-219ENST00000531657 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms