RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 MINPP1Q9UNW1 487 aa24.49■■□□□ 1.51
UBXN1-212ENST00000531625 PI4KAP2A4QPH2 592 aa24.47■■□□□ 1.51
UBXN1-212ENST00000531625 WTIPA6NIX2 430 aaPredicted RBP24.47■■□□□ 1.51
UBXN1-212ENST00000531625 CTU1Q7Z7A3 348 aaKnown RBP24.47■■□□□ 1.51
UBXN1-212ENST00000531625 PI4KAP1Q8N8J0 262 aa24.47■■□□□ 1.51
UBXN1-212ENST00000531625 MMP14P50281 582 aa24.46■■□□□ 1.51
UBXN1-212ENST00000531625 DACT2Q5SW24 774 aa24.46■■□□□ 1.51
UBXN1-212ENST00000531625 TSPYL6Q8N831 410 aa24.46■■□□□ 1.51
UBXN1-212ENST00000531625 GREM2Q9H772 168 aa24.46■■□□□ 1.51
UBXN1-212ENST00000531625 MYH3P11055 1940 aa24.45■■□□□ 1.51
UBXN1-212ENST00000531625 MYO3BQ8WXR4 1341 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 CCT4P50991 539 aaKnown RBP24.45■■□□□ 1.5
UBXN1-212ENST00000531625 NEXNQ0ZGT2 675 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 NBPF9Q3BBW0 867 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 CCDC184Q52MB2 194 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 STRIP1Q5VSL9 837 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 OGFOD1Q8N543 542 aa24.45■■□□□ 1.5
UBXN1-212ENST00000531625 COA1Q9GZY4 146 aa24.44■■□□□ 1.5
UBXN1-212ENST00000531625 MRS2Q9HD23 443 aa24.44■■□□□ 1.5
UBXN1-212ENST00000531625 UBE2Q2LH0YL09 131 aa24.43■■□□□ 1.5
UBXN1-212ENST00000531625 WNT10BO00744 389 aa24.43■■□□□ 1.5
UBXN1-212ENST00000531625 MOB2Q70IA6 237 aa24.43■■□□□ 1.5
UBXN1-212ENST00000531625 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
UBXN1-212ENST00000531625 NEURL1BA8MQ27 555 aa24.42■■□□□ 1.5
UBXN1-212ENST00000531625 STK31Q9BXU1 1019 aa24.42■■□□□ 1.5
UBXN1-212ENST00000531625 SCAF8Q9UPN6 1271 aaKnown RBP24.42■■□□□ 1.5
UBXN1-212ENST00000531625 ZNF646O15015 1829 aaPredicted RBP24.41■■□□□ 1.5
UBXN1-212ENST00000531625 H7C1W4 665 aa24.41■■□□□ 1.5
UBXN1-212ENST00000531625 SOX10P56693 466 aa24.41■■□□□ 1.5
UBXN1-212ENST00000531625 CWF19L2Q2TBE0 894 aaKnown RBP24.41■■□□□ 1.5
UBXN1-212ENST00000531625 PRAMEF18Q5VWM3 479 aa24.41■■□□□ 1.5
UBXN1-212ENST00000531625 MXD3Q9BW11 206 aa24.41■■□□□ 1.5
UBXN1-212ENST00000531625 NF2P35240 595 aa24.4■■□□□ 1.5
UBXN1-212ENST00000531625 IGHMBP2P38935 993 aaKnown RBP24.4■■□□□ 1.5
UBXN1-212ENST00000531625 TM4SF4P48230 202 aa24.4■■□□□ 1.5
UBXN1-212ENST00000531625 PKN2Q16513 984 aaKnown RBP24.4■■□□□ 1.5
UBXN1-212ENST00000531625 PLA2G12BQ9BX93 195 aa24.4■■□□□ 1.5
UBXN1-212ENST00000531625 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
UBXN1-212ENST00000531625 UBE3BQ7Z3V4 1068 aa24.39■■□□□ 1.49
UBXN1-212ENST00000531625 TXNRD3Q86VQ6 643 aa24.39■■□□□ 1.49
UBXN1-212ENST00000531625 SPEF2Q9C093 1822 aa24.38■■□□□ 1.49
UBXN1-212ENST00000531625 TTLL12Q14166 644 aaPredicted RBP24.38■■□□□ 1.49
UBXN1-212ENST00000531625 TSR2Q969E8 191 aaKnown RBP24.38■■□□□ 1.49
UBXN1-212ENST00000531625 FBXW7Q969H0 707 aa24.38■■□□□ 1.49
UBXN1-212ENST00000531625 ANKRD2Q9GZV1 360 aa24.38■■□□□ 1.49
UBXN1-212ENST00000531625 ZNF804BA4D1E1 1349 aa24.37■■□□□ 1.49
UBXN1-212ENST00000531625 CCDC27Q2M243 656 aa24.37■■□□□ 1.49
UBXN1-212ENST00000531625 TTLL5Q6EMB2 1281 aa24.37■■□□□ 1.49
UBXN1-212ENST00000531625 MIER1Q8N108 512 aa24.37■■□□□ 1.49
UBXN1-212ENST00000531625 ZNF296Q8WUU4 475 aaPredicted RBP24.37■■□□□ 1.49
UBXN1-212ENST00000531625 HPS5Q9UPZ3 1129 aa24.37■■□□□ 1.49
UBXN1-212ENST00000531625 TBC1D8O95759 1140 aa24.36■■□□□ 1.49
UBXN1-212ENST00000531625 ITGA6P23229 1130 aa24.36■■□□□ 1.49
UBXN1-212ENST00000531625 GCKRQ14397 625 aa24.36■■□□□ 1.49
UBXN1-212ENST00000531625 G2E3Q7L622 706 aa24.36■■□□□ 1.49
UBXN1-212ENST00000531625 APOBEC3FQ8IUX4 373 aaKnown RBP24.36■■□□□ 1.49
UBXN1-212ENST00000531625 ZBED3Q96IU2 234 aaPredicted RBP24.36■■□□□ 1.49
UBXN1-212ENST00000531625 HDAC9Q9UKV0 1011 aa24.36■■□□□ 1.49
UBXN1-212ENST00000531625 SASH1O94885 1247 aa24.35■■□□□ 1.49
UBXN1-212ENST00000531625 SLC4A2P04920 1241 aa24.35■■□□□ 1.49
UBXN1-212ENST00000531625 CSF1RP07333 972 aa24.35■■□□□ 1.49
UBXN1-212ENST00000531625 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
UBXN1-212ENST00000531625 ARMC9Q7Z3E5 817 aa24.35■■□□□ 1.49
UBXN1-212ENST00000531625 CFHR5Q9BXR6 569 aa24.35■■□□□ 1.49
UBXN1-212ENST00000531625 CASP7P55210 303 aa24.34■■□□□ 1.49
UBXN1-212ENST00000531625 SREBF2Q12772 1141 aa24.34■■□□□ 1.49
UBXN1-212ENST00000531625 MPHOSPH8Q99549 860 aa24.34■■□□□ 1.49
UBXN1-212ENST00000531625 GPR25O00155 361 aa24.33■■□□□ 1.49
UBXN1-212ENST00000531625 KLRK1P26718 216 aa24.33■■□□□ 1.49
UBXN1-212ENST00000531625 PTPN12Q05209 780 aaKnown RBP24.33■■□□□ 1.49
UBXN1-212ENST00000531625 LDLRAD1Q5T700 205 aa24.33■■□□□ 1.49
UBXN1-212ENST00000531625 KIAA0825Q8IV33 1275 aa24.33■■□□□ 1.49
UBXN1-212ENST00000531625 PCDH10Q9P2E7 1040 aa24.33■■□□□ 1.49
UBXN1-212ENST00000531625 CCER2I3L3R5 266 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 GTF2IP78347 998 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 FLIIQ13045 1269 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 WWC1Q8IX03 1113 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 IL16Q14005 1332 aa24.32■■□□□ 1.48
UBXN1-212ENST00000531625 LINS1Q8NG48 757 aa24.31■■□□□ 1.48
UBXN1-212ENST00000531625 CD209Q9NNX6 404 aa24.31■■□□□ 1.48
UBXN1-212ENST00000531625 COL1A1P02452 1464 aaPredicted RBP24.31■■□□□ 1.48
UBXN1-212ENST00000531625 KCNJ4P48050 445 aa24.3■■□□□ 1.48
UBXN1-212ENST00000531625 CHRNDQ07001 517 aa24.3■■□□□ 1.48
UBXN1-212ENST00000531625 C15orf52Q6ZUT6 534 aaKnown RBP24.3■■□□□ 1.48
UBXN1-212ENST00000531625 DNAAF4Q8WXU2 420 aa24.3■■□□□ 1.48
UBXN1-212ENST00000531625 MKRN3Q13064 507 aaKnown RBP24.29■■□□□ 1.48
UBXN1-212ENST00000531625 NCBP3Q53F19 620 aaKnown RBP24.29■■□□□ 1.48
UBXN1-212ENST00000531625 SPRYD7Q5W111 196 aa24.29■■□□□ 1.48
UBXN1-212ENST00000531625 MTMR14Q8NCE2 650 aa24.29■■□□□ 1.48
UBXN1-212ENST00000531625 IRS2Q9Y4H2 1338 aa24.29■■□□□ 1.48
UBXN1-212ENST00000531625 CACNA1FO60840 1977 aa24.29■■□□□ 1.48
UBXN1-212ENST00000531625 PRPF38BQ5VTL8 546 aaKnown RBP24.28■■□□□ 1.48
UBXN1-212ENST00000531625 FBXO46Q6PJ61 603 aaPredicted RBP24.28■■□□□ 1.48
UBXN1-212ENST00000531625 DEFB129Q9H1M3 183 aa24.28■■□□□ 1.48
UBXN1-212ENST00000531625 ANKRD18BA2A2Z9 1011 aa24.27■■□□□ 1.48
UBXN1-212ENST00000531625 FKTNO75072 461 aa24.27■■□□□ 1.48
UBXN1-212ENST00000531625 ALDH1A1P00352 501 aa24.27■■□□□ 1.48
UBXN1-212ENST00000531625 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
UBXN1-212ENST00000531625 PRKG1Q13976 671 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms